Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF550Q7Z398 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF550Q7Z398 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF550Q7Z398 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF550Q7Z398 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF550Q7Z398 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF550Q7Z398 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF550Q7Z398 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ZNF550Q7Z398 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.75■□□□□ 0.91
ZNF550Q7Z398 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.75■□□□□ 0.91
ZNF550Q7Z398 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF550Q7Z398 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.75■□□□□ 0.91
ZNF550Q7Z398 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF550Q7Z398 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF550Q7Z398 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF550Q7Z398 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF550Q7Z398 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF550Q7Z398 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF550Q7Z398 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
ZNF550Q7Z398 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF550Q7Z398 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF550Q7Z398 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ZNF550Q7Z398 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.74■□□□□ 0.91
ZNF550Q7Z398 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF550Q7Z398 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.74■□□□□ 0.91
ZNF550Q7Z398 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
ZNF550Q7Z398 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF550Q7Z398 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF550Q7Z398 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ZNF550Q7Z398 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF550Q7Z398 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF550Q7Z398 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF550Q7Z398 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF550Q7Z398 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF550Q7Z398 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF550Q7Z398 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF550Q7Z398 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.73■□□□□ 0.91
ZNF550Q7Z398 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF550Q7Z398 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF550Q7Z398 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF550Q7Z398 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF550Q7Z398 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ZNF550Q7Z398 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNF550Q7Z398 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF550Q7Z398 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF550Q7Z398 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF550Q7Z398 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.72■□□□□ 0.91
ZNF550Q7Z398 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.72■□□□□ 0.91
ZNF550Q7Z398 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF550Q7Z398 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF550Q7Z398 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF550Q7Z398 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF550Q7Z398 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNF550Q7Z398 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNF550Q7Z398 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF550Q7Z398 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNF550Q7Z398 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF550Q7Z398 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF550Q7Z398 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF550Q7Z398 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNF550Q7Z398 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNF550Q7Z398 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF550Q7Z398 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNF550Q7Z398 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.71■□□□□ 0.91
ZNF550Q7Z398 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF550Q7Z398 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ZNF550Q7Z398 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF550Q7Z398 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF550Q7Z398 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF550Q7Z398 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF550Q7Z398 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNF550Q7Z398 AC021242.3-201ENST00000607598 1377 ntBASIC20.71■□□□□ 0.91
ZNF550Q7Z398 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
ZNF550Q7Z398 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ZNF550Q7Z398 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF550Q7Z398 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF550Q7Z398 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNF550Q7Z398 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.7■□□□□ 0.9
ZNF550Q7Z398 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF550Q7Z398 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.7■□□□□ 0.9
ZNF550Q7Z398 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF550Q7Z398 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ZNF550Q7Z398 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.69■□□□□ 0.9
ZNF550Q7Z398 AC012676.1-201ENST00000574705 1949 ntBASIC20.69■□□□□ 0.9
ZNF550Q7Z398 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF550Q7Z398 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF550Q7Z398 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF550Q7Z398 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF550Q7Z398 TSPY9P-201ENST00000440215 945 ntBASIC20.69■□□□□ 0.9
ZNF550Q7Z398 TSPY11P-201ENST00000442607 1045 ntBASIC20.69■□□□□ 0.9
ZNF550Q7Z398 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF550Q7Z398 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF550Q7Z398 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.68■□□□□ 0.9
ZNF550Q7Z398 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ZNF550Q7Z398 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF550Q7Z398 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF550Q7Z398 DUSP8P3-201ENST00000399571 1760 ntBASIC20.68■□□□□ 0.9
ZNF550Q7Z398 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF550Q7Z398 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF550Q7Z398 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms