Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C11orf88Q6PI97 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C11orf88Q6PI97 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
C11orf88Q6PI97 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.47■□□□□ 0.71
C11orf88Q6PI97 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.47■□□□□ 0.71
C11orf88Q6PI97 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C11orf88Q6PI97 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C11orf88Q6PI97 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.47■□□□□ 0.71
C11orf88Q6PI97 AC138932.1-201ENST00000534164 6830 ntBASIC19.47■□□□□ 0.71
C11orf88Q6PI97 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
C11orf88Q6PI97 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.47■□□□□ 0.71
C11orf88Q6PI97 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C11orf88Q6PI97 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C11orf88Q6PI97 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C11orf88Q6PI97 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C11orf88Q6PI97 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C11orf88Q6PI97 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.47■□□□□ 0.71
C11orf88Q6PI97 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.47■□□□□ 0.71
C11orf88Q6PI97 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.47■□□□□ 0.71
C11orf88Q6PI97 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C11orf88Q6PI97 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C11orf88Q6PI97 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C11orf88Q6PI97 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C11orf88Q6PI97 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.46■□□□□ 0.71
C11orf88Q6PI97 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.46■□□□□ 0.71
C11orf88Q6PI97 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
C11orf88Q6PI97 AC074183.2-201ENST00000623112 922 ntBASIC19.46■□□□□ 0.71
C11orf88Q6PI97 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C11orf88Q6PI97 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C11orf88Q6PI97 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C11orf88Q6PI97 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
C11orf88Q6PI97 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C11orf88Q6PI97 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
C11orf88Q6PI97 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
C11orf88Q6PI97 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.45■□□□□ 0.7
C11orf88Q6PI97 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
C11orf88Q6PI97 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.45■□□□□ 0.7
C11orf88Q6PI97 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C11orf88Q6PI97 AC093536.1-201ENST00000569153 554 ntBASIC19.45■□□□□ 0.7
C11orf88Q6PI97 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
C11orf88Q6PI97 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C11orf88Q6PI97 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C11orf88Q6PI97 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C11orf88Q6PI97 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C11orf88Q6PI97 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
C11orf88Q6PI97 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
C11orf88Q6PI97 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.45■□□□□ 0.7
C11orf88Q6PI97 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.45■□□□□ 0.7
C11orf88Q6PI97 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.45■□□□□ 0.7
C11orf88Q6PI97 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
C11orf88Q6PI97 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C11orf88Q6PI97 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
C11orf88Q6PI97 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C11orf88Q6PI97 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C11orf88Q6PI97 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C11orf88Q6PI97 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C11orf88Q6PI97 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
C11orf88Q6PI97 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
C11orf88Q6PI97 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C11orf88Q6PI97 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
C11orf88Q6PI97 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C11orf88Q6PI97 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.43■□□□□ 0.7
C11orf88Q6PI97 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.43■□□□□ 0.7
C11orf88Q6PI97 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C11orf88Q6PI97 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C11orf88Q6PI97 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C11orf88Q6PI97 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
C11orf88Q6PI97 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C11orf88Q6PI97 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
C11orf88Q6PI97 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C11orf88Q6PI97 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.43■□□□□ 0.7
C11orf88Q6PI97 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
C11orf88Q6PI97 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
C11orf88Q6PI97 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
C11orf88Q6PI97 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C11orf88Q6PI97 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.43■□□□□ 0.7
C11orf88Q6PI97 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.43■□□□□ 0.7
C11orf88Q6PI97 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C11orf88Q6PI97 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C11orf88Q6PI97 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
C11orf88Q6PI97 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
C11orf88Q6PI97 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.42■□□□□ 0.7
C11orf88Q6PI97 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
C11orf88Q6PI97 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.42■□□□□ 0.7
C11orf88Q6PI97 RAP2CP1-202ENST00000605179 643 ntBASIC19.42■□□□□ 0.7
C11orf88Q6PI97 MIR6089-201ENST00000616698 64 ntBASIC19.42■□□□□ 0.7
C11orf88Q6PI97 AL024507.2-201ENST00000606070 2574 ntBASIC19.42■□□□□ 0.7
C11orf88Q6PI97 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C11orf88Q6PI97 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C11orf88Q6PI97 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C11orf88Q6PI97 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
C11orf88Q6PI97 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
C11orf88Q6PI97 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
C11orf88Q6PI97 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C11orf88Q6PI97 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
C11orf88Q6PI97 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C11orf88Q6PI97 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.41■□□□□ 0.7
C11orf88Q6PI97 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C11orf88Q6PI97 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
C11orf88Q6PI97 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms