Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.03■□□□□ 0.32
MRPL54Q6P161 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRPL54Q6P161 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.03■□□□□ 0.32
MRPL54Q6P161 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRPL54Q6P161 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.03■□□□□ 0.32
MRPL54Q6P161 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MRPL54Q6P161 AL121603.2-201ENST00000557373 2117 ntBASIC17.03■□□□□ 0.32
MRPL54Q6P161 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRPL54Q6P161 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MRPL54Q6P161 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
MRPL54Q6P161 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRPL54Q6P161 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
MRPL54Q6P161 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRPL54Q6P161 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.02■□□□□ 0.32
MRPL54Q6P161 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.02■□□□□ 0.32
MRPL54Q6P161 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRPL54Q6P161 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
MRPL54Q6P161 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MRPL54Q6P161 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MRPL54Q6P161 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MRPL54Q6P161 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MRPL54Q6P161 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.02■□□□□ 0.31
MRPL54Q6P161 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MRPL54Q6P161 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MRPL54Q6P161 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MRPL54Q6P161 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRPL54Q6P161 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.01■□□□□ 0.31
MRPL54Q6P161 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRPL54Q6P161 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MRPL54Q6P161 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.01■□□□□ 0.31
MRPL54Q6P161 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
MRPL54Q6P161 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRPL54Q6P161 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRPL54Q6P161 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.01■□□□□ 0.31
MRPL54Q6P161 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
MRPL54Q6P161 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
MRPL54Q6P161 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRPL54Q6P161 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MRPL54Q6P161 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MRPL54Q6P161 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.01■□□□□ 0.31
MRPL54Q6P161 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17■□□□□ 0.31
MRPL54Q6P161 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17■□□□□ 0.31
MRPL54Q6P161 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
MRPL54Q6P161 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MRPL54Q6P161 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17■□□□□ 0.31
MRPL54Q6P161 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MRPL54Q6P161 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17■□□□□ 0.31
MRPL54Q6P161 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MRPL54Q6P161 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
MRPL54Q6P161 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17■□□□□ 0.31
MRPL54Q6P161 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17■□□□□ 0.31
MRPL54Q6P161 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17■□□□□ 0.31
MRPL54Q6P161 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MRPL54Q6P161 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MRPL54Q6P161 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17■□□□□ 0.31
MRPL54Q6P161 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MRPL54Q6P161 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MRPL54Q6P161 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MRPL54Q6P161 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MRPL54Q6P161 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MRPL54Q6P161 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
MRPL54Q6P161 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
MRPL54Q6P161 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
MRPL54Q6P161 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MRPL54Q6P161 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MRPL54Q6P161 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
MRPL54Q6P161 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MRPL54Q6P161 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MRPL54Q6P161 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MRPL54Q6P161 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
MRPL54Q6P161 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
MRPL54Q6P161 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MRPL54Q6P161 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MRPL54Q6P161 MIR3665-201ENST00000578708 105 ntBASIC16.98■□□□□ 0.31
MRPL54Q6P161 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MRPL54Q6P161 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MRPL54Q6P161 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.98■□□□□ 0.31
MRPL54Q6P161 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MRPL54Q6P161 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.98■□□□□ 0.31
MRPL54Q6P161 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MRPL54Q6P161 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.97■□□□□ 0.31
MRPL54Q6P161 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
MRPL54Q6P161 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
MRPL54Q6P161 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MRPL54Q6P161 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
MRPL54Q6P161 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
MRPL54Q6P161 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.97■□□□□ 0.31
MRPL54Q6P161 AC148477.6-201ENST00000623746 465 ntBASIC16.97■□□□□ 0.31
MRPL54Q6P161 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MRPL54Q6P161 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.97■□□□□ 0.31
MRPL54Q6P161 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
MRPL54Q6P161 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
MRPL54Q6P161 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MRPL54Q6P161 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
MRPL54Q6P161 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MRPL54Q6P161 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
MRPL54Q6P161 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
MRPL54Q6P161 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MRPL54Q6P161 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MRPL54Q6P161 AC008813.1-201ENST00000536597 885 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms