Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.19■■□□□ 1.78
KRT40Q6A162 KRT125P-201ENST00000546827 989 ntBASIC26.19■■□□□ 1.78
KRT40Q6A162 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
KRT40Q6A162 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
KRT40Q6A162 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.19■■□□□ 1.78
KRT40Q6A162 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
KRT40Q6A162 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
KRT40Q6A162 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.18■■□□□ 1.78
KRT40Q6A162 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.18■■□□□ 1.78
KRT40Q6A162 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
KRT40Q6A162 KRT16P3-201ENST00000439127 1283 ntBASIC26.18■■□□□ 1.78
KRT40Q6A162 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.18■■□□□ 1.78
KRT40Q6A162 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.18■■□□□ 1.78
KRT40Q6A162 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.18■■□□□ 1.78
KRT40Q6A162 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.18■■□□□ 1.78
KRT40Q6A162 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
KRT40Q6A162 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
KRT40Q6A162 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
KRT40Q6A162 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
KRT40Q6A162 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
KRT40Q6A162 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
KRT40Q6A162 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
KRT40Q6A162 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
KRT40Q6A162 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
KRT40Q6A162 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.17■■□□□ 1.78
KRT40Q6A162 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
KRT40Q6A162 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
KRT40Q6A162 AL139246.5-201ENST00000606645 996 ntBASIC26.17■■□□□ 1.78
KRT40Q6A162 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.17■■□□□ 1.78
KRT40Q6A162 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC26.17■■□□□ 1.78
KRT40Q6A162 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.17■■□□□ 1.78
KRT40Q6A162 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
KRT40Q6A162 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
KRT40Q6A162 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
KRT40Q6A162 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.16■■□□□ 1.78
KRT40Q6A162 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
KRT40Q6A162 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
KRT40Q6A162 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.16■■□□□ 1.78
KRT40Q6A162 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
KRT40Q6A162 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.16■■□□□ 1.78
KRT40Q6A162 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.16■■□□□ 1.78
KRT40Q6A162 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
KRT40Q6A162 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
KRT40Q6A162 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.15■■□□□ 1.78
KRT40Q6A162 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
KRT40Q6A162 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
KRT40Q6A162 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.15■■□□□ 1.78
KRT40Q6A162 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
KRT40Q6A162 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC26.14■■□□□ 1.78
KRT40Q6A162 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.14■■□□□ 1.78
KRT40Q6A162 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
KRT40Q6A162 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.14■■□□□ 1.78
KRT40Q6A162 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.14■■□□□ 1.78
KRT40Q6A162 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.14■■□□□ 1.78
KRT40Q6A162 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
KRT40Q6A162 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.14■■□□□ 1.78
KRT40Q6A162 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
KRT40Q6A162 AC092068.2-201ENST00000590491 1708 ntBASIC26.14■■□□□ 1.77
KRT40Q6A162 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
KRT40Q6A162 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
KRT40Q6A162 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
KRT40Q6A162 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
KRT40Q6A162 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.13■■□□□ 1.77
KRT40Q6A162 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.13■■□□□ 1.77
KRT40Q6A162 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.13■■□□□ 1.77
KRT40Q6A162 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
KRT40Q6A162 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.13■■□□□ 1.77
KRT40Q6A162 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
KRT40Q6A162 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.13■■□□□ 1.77
KRT40Q6A162 AC092028.1-203ENST00000608262 953 ntBASIC26.13■■□□□ 1.77
KRT40Q6A162 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
KRT40Q6A162 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
KRT40Q6A162 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.12■■□□□ 1.77
KRT40Q6A162 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
KRT40Q6A162 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
KRT40Q6A162 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
KRT40Q6A162 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
KRT40Q6A162 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
KRT40Q6A162 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.12■■□□□ 1.77
KRT40Q6A162 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
KRT40Q6A162 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.12■■□□□ 1.77
KRT40Q6A162 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
KRT40Q6A162 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
KRT40Q6A162 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.11■■□□□ 1.77
KRT40Q6A162 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
KRT40Q6A162 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.11■■□□□ 1.77
KRT40Q6A162 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.11■■□□□ 1.77
KRT40Q6A162 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.11■■□□□ 1.77
KRT40Q6A162 MIR6722-201ENST00000617286 78 ntBASIC26.11■■□□□ 1.77
KRT40Q6A162 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
KRT40Q6A162 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC26.11■■□□□ 1.77
KRT40Q6A162 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
KRT40Q6A162 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.1■■□□□ 1.77
KRT40Q6A162 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
KRT40Q6A162 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
KRT40Q6A162 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
KRT40Q6A162 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
KRT40Q6A162 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.1■■□□□ 1.77
KRT40Q6A162 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
KRT40Q6A162 TSPY9P-201ENST00000440215 945 ntBASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms