Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCGF3Q3KNV8 AC021242.3-201ENST00000607598 1377 ntBASIC19.86■□□□□ 0.77
PCGF3Q3KNV8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCGF3Q3KNV8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.86■□□□□ 0.77
PCGF3Q3KNV8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCGF3Q3KNV8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PCGF3Q3KNV8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCGF3Q3KNV8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.86■□□□□ 0.77
PCGF3Q3KNV8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.86■□□□□ 0.77
PCGF3Q3KNV8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.86■□□□□ 0.77
PCGF3Q3KNV8 MIR4787-201ENST00000607364 84 ntBASIC19.86■□□□□ 0.77
PCGF3Q3KNV8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCGF3Q3KNV8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCGF3Q3KNV8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PCGF3Q3KNV8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCGF3Q3KNV8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCGF3Q3KNV8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.85■□□□□ 0.77
PCGF3Q3KNV8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCGF3Q3KNV8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.85■□□□□ 0.77
PCGF3Q3KNV8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.85■□□□□ 0.77
PCGF3Q3KNV8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCGF3Q3KNV8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.85■□□□□ 0.77
PCGF3Q3KNV8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCGF3Q3KNV8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCGF3Q3KNV8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PCGF3Q3KNV8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCGF3Q3KNV8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCGF3Q3KNV8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.84■□□□□ 0.77
PCGF3Q3KNV8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
PCGF3Q3KNV8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.83■□□□□ 0.77
PCGF3Q3KNV8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCGF3Q3KNV8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCGF3Q3KNV8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCGF3Q3KNV8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.83■□□□□ 0.77
PCGF3Q3KNV8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.83■□□□□ 0.77
PCGF3Q3KNV8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.83■□□□□ 0.77
PCGF3Q3KNV8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
PCGF3Q3KNV8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
PCGF3Q3KNV8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCGF3Q3KNV8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCGF3Q3KNV8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
PCGF3Q3KNV8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCGF3Q3KNV8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCGF3Q3KNV8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.82■□□□□ 0.76
PCGF3Q3KNV8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
PCGF3Q3KNV8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PCGF3Q3KNV8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCGF3Q3KNV8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.82■□□□□ 0.76
PCGF3Q3KNV8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCGF3Q3KNV8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.82■□□□□ 0.76
PCGF3Q3KNV8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PCGF3Q3KNV8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCGF3Q3KNV8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCGF3Q3KNV8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PCGF3Q3KNV8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.82■□□□□ 0.76
PCGF3Q3KNV8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.82■□□□□ 0.76
PCGF3Q3KNV8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.82■□□□□ 0.76
PCGF3Q3KNV8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCGF3Q3KNV8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCGF3Q3KNV8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.82■□□□□ 0.76
PCGF3Q3KNV8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.82■□□□□ 0.76
PCGF3Q3KNV8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
PCGF3Q3KNV8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCGF3Q3KNV8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCGF3Q3KNV8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.81■□□□□ 0.76
PCGF3Q3KNV8 AC233723.2-201ENST00000623798 2106 ntBASIC19.81■□□□□ 0.76
PCGF3Q3KNV8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCGF3Q3KNV8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCGF3Q3KNV8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCGF3Q3KNV8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCGF3Q3KNV8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCGF3Q3KNV8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCGF3Q3KNV8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCGF3Q3KNV8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCGF3Q3KNV8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.8■□□□□ 0.76
PCGF3Q3KNV8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
PCGF3Q3KNV8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCGF3Q3KNV8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.8■□□□□ 0.76
PCGF3Q3KNV8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCGF3Q3KNV8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.8■□□□□ 0.76
PCGF3Q3KNV8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCGF3Q3KNV8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.8■□□□□ 0.76
PCGF3Q3KNV8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCGF3Q3KNV8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCGF3Q3KNV8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCGF3Q3KNV8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
PCGF3Q3KNV8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCGF3Q3KNV8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PCGF3Q3KNV8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.79■□□□□ 0.76
PCGF3Q3KNV8 AC092028.1-203ENST00000608262 953 ntBASIC19.79■□□□□ 0.76
PCGF3Q3KNV8 HLA-L-211ENST00000482052 1765 ntBASIC19.79■□□□□ 0.76
PCGF3Q3KNV8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCGF3Q3KNV8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCGF3Q3KNV8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCGF3Q3KNV8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCGF3Q3KNV8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCGF3Q3KNV8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCGF3Q3KNV8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCGF3Q3KNV8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
PCGF3Q3KNV8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms