Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 YLR467C-AYLR467C-A 483 nt5.03□□□□□ -1.6
VPS38Q05919 YML133W-BYML133W-B 483 nt5.03□□□□□ -1.6
VPS38Q05919 PEX12YMR026C 1200 nt5.03□□□□□ -1.6
VPS38Q05919 YNL339W-BYNL339W-B 483 nt5.03□□□□□ -1.6
VPS38Q05919 YBL113W-AYBL113W-A 483 nt5.03□□□□□ -1.6
VPS38Q05919 YOR396C-AYOR396C-A 483 nt5.03□□□□□ -1.6
VPS38Q05919 YPL283W-BYPL283W-B 483 nt5.03□□□□□ -1.6
VPS38Q05919 YPR204C-AYPR204C-A 483 nt5.03□□□□□ -1.6
VPS38Q05919 ARC40YBR234C 1155 nt5.03□□□□□ -1.6
VPS38Q05919 TIP20YGL145W 2106 nt5.03□□□□□ -1.6
VPS38Q05919 PXA1YPL147W 2613 nt5.03□□□□□ -1.6
VPS38Q05919 PSE1YMR308C 3270 nt5.03□□□□□ -1.6
VPS38Q05919 TUB2YFL037W 1374 nt5.03□□□□□ -1.6
VPS38Q05919 TUB3YML124C 1338 nt5.02□□□□□ -1.61
VPS38Q05919 LUC7YDL087C 786 nt5.02□□□□□ -1.61
VPS38Q05919 tK(CUU)CtK(CUU)C 73 nt5.02□□□□□ -1.61
VPS38Q05919 tK(CUU)D1tK(CUU)D1 73 nt5.02□□□□□ -1.61
VPS38Q05919 tK(CUU)D2tK(CUU)D2 73 nt5.02□□□□□ -1.61
VPS38Q05919 tK(CUU)E1tK(CUU)E1 73 nt5.02□□□□□ -1.61
VPS38Q05919 tK(CUU)E2tK(CUU)E2 73 nt5.02□□□□□ -1.61
VPS38Q05919 tK(CUU)FtK(CUU)F 73 nt5.02□□□□□ -1.61
VPS38Q05919 tK(CUU)G1tK(CUU)G1 73 nt5.02□□□□□ -1.61
VPS38Q05919 tK(CUU)G2tK(CUU)G2 73 nt5.02□□□□□ -1.61
VPS38Q05919 tK(CUU)G3tK(CUU)G3 73 nt5.02□□□□□ -1.61
VPS38Q05919 tK(CUU)ItK(CUU)I 73 nt5.02□□□□□ -1.61
VPS38Q05919 tK(CUU)JtK(CUU)J 73 nt5.02□□□□□ -1.61
VPS38Q05919 tK(CUU)KtK(CUU)K 73 nt5.02□□□□□ -1.61
VPS38Q05919 tK(CUU)MtK(CUU)M 73 nt5.02□□□□□ -1.61
VPS38Q05919 tK(CUU)PtK(CUU)P 73 nt5.02□□□□□ -1.61
VPS38Q05919 MOB2YFL034C-B 864 nt5.02□□□□□ -1.61
VPS38Q05919 YFR034W-AYFR034W-A 288 nt5.02□□□□□ -1.61
VPS38Q05919 PRM10YJL108C 1152 nt5.02□□□□□ -1.61
VPS38Q05919 NTR2YKR022C 969 nt5.02□□□□□ -1.61
VPS38Q05919 APS1YLR170C 471 nt5.02□□□□□ -1.61
VPS38Q05919 CPR6YLR216C 1116 nt5.02□□□□□ -1.61
VPS38Q05919 BUD17YNR027W 954 nt5.02□□□□□ -1.61
VPS38Q05919 YCL021W-AYCL021W-A 378 nt5.02□□□□□ -1.61
VPS38Q05919 YER158CYER158C 1722 nt5.02□□□□□ -1.61
VPS38Q05919 YGR125WYGR125W 3111 nt5.01□□□□□ -1.61
VPS38Q05919 MNN11YJL183W 1269 nt5.01□□□□□ -1.61
VPS38Q05919 ZPR1YGR211W 1461 nt5□□□□□ -1.61
VPS38Q05919 PCL8YPL219W 1479 nt5□□□□□ -1.61
VPS38Q05919 VHS2YIL135C 1311 nt5□□□□□ -1.61
VPS38Q05919 OAZ1YPL052W 879 nt5□□□□□ -1.61
VPS38Q05919 snR34snR34 203 nt5□□□□□ -1.61
VPS38Q05919 ARN1YHL040C 1884 nt5□□□□□ -1.61
VPS38Q05919 TFG1YGR186W 2208 nt5□□□□□ -1.61
VPS38Q05919 DEG1YFL001W 1329 nt4.99□□□□□ -1.61
VPS38Q05919 DRN1YGR093W 1524 nt4.99□□□□□ -1.61
VPS38Q05919 NAT2YGR147C 867 nt4.99□□□□□ -1.61
VPS38Q05919 RPS0BYLR048W 759 nt4.99□□□□□ -1.61
VPS38Q05919 SNO1YMR095C 675 nt4.99□□□□□ -1.61
VPS38Q05919 CDC21YOR074C 915 nt4.99□□□□□ -1.61
VPS38Q05919 CPS1YJL172W 1731 nt4.99□□□□□ -1.61
VPS38Q05919 PDR15YDR406W 4590 nt4.99□□□□□ -1.61
VPS38Q05919 SEC9YGR009C 1956 nt4.98□□□□□ -1.61
VPS38Q05919 NUP2YLR335W 2163 nt4.98□□□□□ -1.61
VPS38Q05919 GLE2YER107C 1098 nt4.98□□□□□ -1.61
VPS38Q05919 CAX4YGR036C 720 nt4.98□□□□□ -1.61
VPS38Q05919 CAB4YGR277C 918 nt4.98□□□□□ -1.61
VPS38Q05919 YJR012CYJR012C 624 nt4.98□□□□□ -1.61
VPS38Q05919 MSA2YKR077W 1092 nt4.98□□□□□ -1.61
VPS38Q05919 TVP38YKR088C 1014 nt4.98□□□□□ -1.61
VPS38Q05919 ERG3YLR056W 1098 nt4.98□□□□□ -1.61
VPS38Q05919 PRM9YAR031W 897 nt4.98□□□□□ -1.61
VPS38Q05919 YLR283WYLR283W 945 nt4.98□□□□□ -1.61
VPS38Q05919 HIR2YOR038C 2628 nt4.98□□□□□ -1.61
VPS38Q05919 PAH1YMR165C 2589 nt4.98□□□□□ -1.61
VPS38Q05919 EAR1YMR171C 1653 nt4.97□□□□□ -1.61
VPS38Q05919 RAD57YDR004W 1383 nt4.97□□□□□ -1.61
VPS38Q05919 DSD1YGL196W 1287 nt4.97□□□□□ -1.61
VPS38Q05919 ZRT1YGL255W 1131 nt4.97□□□□□ -1.61
VPS38Q05919 YHR193C-AYHR193C-A 375 nt4.97□□□□□ -1.61
VPS38Q05919 YAL047W-AYAL047W-A 330 nt4.97□□□□□ -1.61
VPS38Q05919 PEX22YAL055W 543 nt4.97□□□□□ -1.61
VPS38Q05919 RPS31YLR167W 459 nt4.97□□□□□ -1.61
VPS38Q05919 RMI1YPL024W 726 nt4.97□□□□□ -1.61
VPS38Q05919 SMA1YPL027W 738 nt4.97□□□□□ -1.61
VPS38Q05919 ATH1YPR026W 3636 nt4.97□□□□□ -1.61
VPS38Q05919 CTT1YGR088W 1689 nt4.96□□□□□ -1.61
VPS38Q05919 FUM1YPL262W 1467 nt4.96□□□□□ -1.62
VPS38Q05919 EGT2YNL327W 3126 nt4.96□□□□□ -1.62
VPS38Q05919 YHR177WYHR177W 1362 nt4.96□□□□□ -1.62
VPS38Q05919 MED2YDL005C 1296 nt4.96□□□□□ -1.62
VPS38Q05919 PEX19YDL065C 1029 nt4.96□□□□□ -1.62
VPS38Q05919 SNA2YDR525W-A 240 nt4.96□□□□□ -1.62
VPS38Q05919 YLR036CYLR036C 612 nt4.96□□□□□ -1.62
VPS38Q05919 CKS1YBR135W 453 nt4.96□□□□□ -1.62
VPS38Q05919 THI22YPR121W 1719 nt4.96□□□□□ -1.62
VPS38Q05919 EKI1YDR147W 1605 nt4.96□□□□□ -1.62
VPS38Q05919 IMA3YIL172C 1770 nt4.96□□□□□ -1.62
VPS38Q05919 IMA4YJL221C 1770 nt4.96□□□□□ -1.62
VPS38Q05919 AIM10YER087W 1731 nt4.95□□□□□ -1.62
VPS38Q05919 SAP4YGL229C 2457 nt4.95□□□□□ -1.62
VPS38Q05919 HPC2YBR215W 1878 nt4.95□□□□□ -1.62
VPS38Q05919 ARG82YDR173C 1068 nt4.95□□□□□ -1.62
VPS38Q05919 UBC1YDR177W 648 nt4.95□□□□□ -1.62
VPS38Q05919 EDC1YGL222C 528 nt4.95□□□□□ -1.62
VPS38Q05919 YGR273CYGR273C 525 nt4.95□□□□□ -1.62
VPS38Q05919 CSR1YLR380W 1227 nt4.95□□□□□ -1.62
Retrieved 100 of 7,029 protein–RNA pairs in 26.2 ms