Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 KAR5YMR065W 1515 nt5.49□□□□□ -1.53
SSL2Q00578 VPS36YLR417W 1701 nt5.49□□□□□ -1.53
SSL2Q00578 RAD53YPL153C 2466 nt5.49□□□□□ -1.53
SSL2Q00578 UBC5YDR059C 447 nt5.49□□□□□ -1.53
SSL2Q00578 VAR1Q0140 1197 nt5.49□□□□□ -1.53
SSL2Q00578 RMR1YGL250W 726 nt5.49□□□□□ -1.53
SSL2Q00578 SPC34YKR037C 888 nt5.49□□□□□ -1.53
SSL2Q00578 MIM2YLR099W-A 264 nt5.49□□□□□ -1.53
SSL2Q00578 YMR178WYMR178W 825 nt5.49□□□□□ -1.53
SSL2Q00578 CSL4YNL232W 879 nt5.49□□□□□ -1.53
SSL2Q00578 BBP1YPL255W 1158 nt5.49□□□□□ -1.53
SSL2Q00578 NHP6AYPR052C 282 nt5.49□□□□□ -1.53
SSL2Q00578 YEL067CYEL067C 588 nt5.48□□□□□ -1.53
SSL2Q00578 YGL188CYGL188C 174 nt5.48□□□□□ -1.53
SSL2Q00578 CIR1YGR207C 786 nt5.48□□□□□ -1.53
SSL2Q00578 GAT4YIR013C 366 nt5.48□□□□□ -1.53
SSL2Q00578 YJR096WYJR096W 849 nt5.48□□□□□ -1.53
SSL2Q00578 ELF1YKL160W 438 nt5.48□□□□□ -1.53
SSL2Q00578 YKL169CYKL169C 384 nt5.48□□□□□ -1.53
SSL2Q00578 YNL134CYNL134C 1131 nt5.48□□□□□ -1.53
SSL2Q00578 NRM1YNR009W 750 nt5.48□□□□□ -1.53
SSL2Q00578 MRL1YPR079W 1146 nt5.48□□□□□ -1.53
SSL2Q00578 UBP7YIL156W 3216 nt5.48□□□□□ -1.53
SSL2Q00578 RRI1YDL216C 1323 nt5.48□□□□□ -1.53
SSL2Q00578 YAP1YML007W 1953 nt5.47□□□□□ -1.53
SSL2Q00578 FPK1YNR047W 2682 nt5.47□□□□□ -1.53
SSL2Q00578 UGA2YBR006W 1494 nt5.47□□□□□ -1.53
SSL2Q00578 RPN12YFR052W 825 nt5.47□□□□□ -1.53
SSL2Q00578 IRC7YFR055W 1023 nt5.47□□□□□ -1.53
SSL2Q00578 YGL194C-AYGL194C-A 243 nt5.47□□□□□ -1.53
SSL2Q00578 URA4YLR420W 1095 nt5.47□□□□□ -1.53
SSL2Q00578 SPS18YNL204C 903 nt5.47□□□□□ -1.53
SSL2Q00578 MEC3YLR288C 1425 nt5.47□□□□□ -1.53
SSL2Q00578 TDA7YNL176C 1911 nt5.46□□□□□ -1.53
SSL2Q00578 YPK3YBR028C 1578 nt5.46□□□□□ -1.53
SSL2Q00578 YMR102CYMR102C 2505 nt5.46□□□□□ -1.53
SSL2Q00578 RVB1YDR190C 1392 nt5.46□□□□□ -1.54
SSL2Q00578 RHB1YCR027C 630 nt5.46□□□□□ -1.54
SSL2Q00578 RPS16BYDL083C 432 nt5.46□□□□□ -1.54
SSL2Q00578 COG7YGL005C 840 nt5.46□□□□□ -1.54
SSL2Q00578 MTR2YKL186C 555 nt5.46□□□□□ -1.54
SSL2Q00578 YAL064WYAL064W 285 nt5.46□□□□□ -1.54
SSL2Q00578 SEC13YLR208W 894 nt5.46□□□□□ -1.54
SSL2Q00578 SER1YOR184W 1188 nt5.46□□□□□ -1.54
SSL2Q00578 SAM4YPL273W 978 nt5.46□□□□□ -1.54
SSL2Q00578 DUR1,2YBR208C 5508 nt5.45□□□□□ -1.54
SSL2Q00578 CRT10YOL063C 2874 nt5.45□□□□□ -1.54
SSL2Q00578 IRC6YFR043C 714 nt5.45□□□□□ -1.54
SSL2Q00578 NSG1YHR133C 876 nt5.45□□□□□ -1.54
SSL2Q00578 NVJ1YHR195W 966 nt5.45□□□□□ -1.54
SSL2Q00578 PCD1YLR151C 1023 nt5.45□□□□□ -1.54
SSL2Q00578 YCL012CYCL012C 405 nt5.45□□□□□ -1.54
SSL2Q00578 PTM1YKL039W 1572 nt5.45□□□□□ -1.54
SSL2Q00578 GIP2YER054C 1647 nt5.45□□□□□ -1.54
SSL2Q00578 ARP2YDL029W 1176 nt5.44□□□□□ -1.54
SSL2Q00578 UBC6YER100W 753 nt5.44□□□□□ -1.54
SSL2Q00578 Q0255Q0255 1419 nt5.44□□□□□ -1.54
SSL2Q00578 YJL047C-AYJL047C-A 135 nt5.44□□□□□ -1.54
SSL2Q00578 MTC2YKL098W 1074 nt5.44□□□□□ -1.54
SSL2Q00578 DXO1YDR370C 1329 nt5.44□□□□□ -1.54
SSL2Q00578 YJR124CYJR124C 1347 nt5.44□□□□□ -1.54
SSL2Q00578 SOG2YOR353C 2376 nt5.43□□□□□ -1.54
SSL2Q00578 CLF1YLR117C 2064 nt5.43□□□□□ -1.54
SSL2Q00578 FRS1YLR060W 1788 nt5.43□□□□□ -1.54
SSL2Q00578 KNH1YDL049C 807 nt5.43□□□□□ -1.54
SSL2Q00578 BUD26YDR241W 288 nt5.43□□□□□ -1.54
SSL2Q00578 YGR035W-AYGR035W-A 222 nt5.43□□□□□ -1.54
SSL2Q00578 MRP21YBL090W 534 nt5.43□□□□□ -1.54
SSL2Q00578 ATG29YPL166W 642 nt5.43□□□□□ -1.54
SSL2Q00578 YTA6YPL074W 2265 nt5.43□□□□□ -1.54
SSL2Q00578 UBA2YDR390C 1911 nt5.42□□□□□ -1.54
SSL2Q00578 PFA5YDR459C 1125 nt5.42□□□□□ -1.54
SSL2Q00578 YLR365WYLR365W 333 nt5.42□□□□□ -1.54
SSL2Q00578 YAP7YOL028C 738 nt5.42□□□□□ -1.54
SSL2Q00578 CKA2YOR061W 1020 nt5.42□□□□□ -1.54
SSL2Q00578 YOR062CYOR062C 807 nt5.42□□□□□ -1.54
SSL2Q00578 YPL062WYPL062W 405 nt5.42□□□□□ -1.54
SSL2Q00578 TIF5YPR041W 1218 nt5.42□□□□□ -1.54
SSL2Q00578 GSH2YOL049W 1476 nt5.42□□□□□ -1.54
SSL2Q00578 NTH2YBR001C 2343 nt5.42□□□□□ -1.54
SSL2Q00578 YHR177WYHR177W 1362 nt5.42□□□□□ -1.54
SSL2Q00578 PGM2YMR105C 1710 nt5.41□□□□□ -1.54
SSL2Q00578 YGL262WYGL262W 528 nt5.41□□□□□ -1.54
SSL2Q00578 YGR273CYGR273C 525 nt5.41□□□□□ -1.54
SSL2Q00578 CSM3YMR048W 954 nt5.41□□□□□ -1.54
SSL2Q00578 VPS20YMR077C 666 nt5.41□□□□□ -1.54
SSL2Q00578 AAH1YNL141W 1044 nt5.41□□□□□ -1.54
SSL2Q00578 PDR16YNL231C 1056 nt5.41□□□□□ -1.54
SSL2Q00578 BUD22YMR014W 1560 nt5.41□□□□□ -1.54
SSL2Q00578 GMC1YDR506C 1827 nt5.41□□□□□ -1.54
SSL2Q00578 SUP35YDR172W 2058 nt5.41□□□□□ -1.54
SSL2Q00578 PEX29YDR479C 1665 nt5.4□□□□□ -1.54
SSL2Q00578 SIS2YKR072C 1689 nt5.4□□□□□ -1.54
SSL2Q00578 BRL1YHR036W 1416 nt5.4□□□□□ -1.54
SSL2Q00578 ADE6YGR061C 4077 nt5.4□□□□□ -1.54
SSL2Q00578 MET3YJR010W 1536 nt5.4□□□□□ -1.54
SSL2Q00578 YDL172CYDL172C 480 nt5.4□□□□□ -1.54
SSL2Q00578 YEA4YEL004W 1029 nt5.4□□□□□ -1.54
SSL2Q00578 YGL218WYGL218W 651 nt5.4□□□□□ -1.54
SSL2Q00578 POP6YGR030C 477 nt5.4□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 16.7 ms