Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.22■■□□□ 1.31
NEK3P51956 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NEK3P51956 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.22■■□□□ 1.31
NEK3P51956 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
NEK3P51956 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.22■■□□□ 1.31
NEK3P51956 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.22■■□□□ 1.31
NEK3P51956 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.22■■□□□ 1.31
NEK3P51956 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NEK3P51956 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
NEK3P51956 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
NEK3P51956 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NEK3P51956 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.21■■□□□ 1.31
NEK3P51956 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.21■■□□□ 1.31
NEK3P51956 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.21■■□□□ 1.31
NEK3P51956 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.21■■□□□ 1.31
NEK3P51956 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NEK3P51956 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NEK3P51956 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.21■■□□□ 1.31
NEK3P51956 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NEK3P51956 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NEK3P51956 C9orf163-202ENST00000624034 2573 ntBASIC23.21■■□□□ 1.31
NEK3P51956 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NEK3P51956 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
NEK3P51956 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
NEK3P51956 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.2■■□□□ 1.3
NEK3P51956 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
NEK3P51956 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
NEK3P51956 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NEK3P51956 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
NEK3P51956 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NEK3P51956 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NEK3P51956 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NEK3P51956 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NEK3P51956 AC131281.2-201ENST00000520478 145 ntBASIC23.19■■□□□ 1.3
NEK3P51956 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NEK3P51956 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
NEK3P51956 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NEK3P51956 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NEK3P51956 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
NEK3P51956 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.18■■□□□ 1.3
NEK3P51956 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.18■■□□□ 1.3
NEK3P51956 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.18■■□□□ 1.3
NEK3P51956 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
NEK3P51956 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NEK3P51956 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEK3P51956 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.18■■□□□ 1.3
NEK3P51956 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.18■■□□□ 1.3
NEK3P51956 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.18■■□□□ 1.3
NEK3P51956 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEK3P51956 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEK3P51956 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.18■■□□□ 1.3
NEK3P51956 AC131274.2-201ENST00000580697 1507 ntBASIC23.18■■□□□ 1.3
NEK3P51956 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
NEK3P51956 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
NEK3P51956 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NEK3P51956 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NEK3P51956 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NEK3P51956 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.17■■□□□ 1.3
NEK3P51956 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
NEK3P51956 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
NEK3P51956 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NEK3P51956 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
NEK3P51956 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.17■■□□□ 1.3
NEK3P51956 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.17■■□□□ 1.3
NEK3P51956 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
NEK3P51956 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
NEK3P51956 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
NEK3P51956 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NEK3P51956 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.16■■□□□ 1.3
NEK3P51956 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NEK3P51956 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NEK3P51956 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
NEK3P51956 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
NEK3P51956 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NEK3P51956 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NEK3P51956 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
NEK3P51956 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.15■■□□□ 1.3
NEK3P51956 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.15■■□□□ 1.3
NEK3P51956 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NEK3P51956 CLDN5-201ENST00000403084 2357 ntBASIC23.15■■□□□ 1.3
NEK3P51956 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NEK3P51956 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.15■■□□□ 1.3
NEK3P51956 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NEK3P51956 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
NEK3P51956 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
NEK3P51956 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
NEK3P51956 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
NEK3P51956 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.14■■□□□ 1.3
NEK3P51956 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NEK3P51956 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.14■■□□□ 1.29
NEK3P51956 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NEK3P51956 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.14■■□□□ 1.29
NEK3P51956 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NEK3P51956 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NEK3P51956 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NEK3P51956 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NEK3P51956 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NEK3P51956 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.13■■□□□ 1.29
NEK3P51956 AL022069.1-201ENST00000568025 1636 ntBASIC23.13■■□□□ 1.29
NEK3P51956 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms