Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF144AP50876 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.93■□□□□ 0.94
RNF144AP50876 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RNF144AP50876 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
RNF144AP50876 AL161729.1-201ENST00000604104 1402 ntBASIC20.93■□□□□ 0.94
RNF144AP50876 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF144AP50876 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF144AP50876 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF144AP50876 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF144AP50876 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF144AP50876 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF144AP50876 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF144AP50876 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF144AP50876 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF144AP50876 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF144AP50876 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF144AP50876 TSPY9P-201ENST00000440215 945 ntBASIC20.92■□□□□ 0.94
RNF144AP50876 TSPY11P-201ENST00000442607 1045 ntBASIC20.92■□□□□ 0.94
RNF144AP50876 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.92■□□□□ 0.94
RNF144AP50876 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RNF144AP50876 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF144AP50876 AC021242.3-201ENST00000607598 1377 ntBASIC20.92■□□□□ 0.94
RNF144AP50876 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RNF144AP50876 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF144AP50876 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF144AP50876 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF144AP50876 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF144AP50876 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF144AP50876 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF144AP50876 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.91■□□□□ 0.94
RNF144AP50876 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RNF144AP50876 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF144AP50876 ANOS2P-203ENST00000472227 1816 ntBASIC20.9■□□□□ 0.94
RNF144AP50876 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF144AP50876 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF144AP50876 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF144AP50876 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF144AP50876 KRT125P-201ENST00000546827 989 ntBASIC20.9■□□□□ 0.94
RNF144AP50876 MIR4787-201ENST00000607364 84 ntBASIC20.9■□□□□ 0.94
RNF144AP50876 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RNF144AP50876 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RNF144AP50876 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF144AP50876 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF144AP50876 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF144AP50876 AC079834.2-201ENST00000609776 1949 ntBASIC20.9■□□□□ 0.94
RNF144AP50876 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF144AP50876 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF144AP50876 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RNF144AP50876 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF144AP50876 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.89■□□□□ 0.93
RNF144AP50876 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF144AP50876 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF144AP50876 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF144AP50876 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF144AP50876 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF144AP50876 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF144AP50876 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF144AP50876 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF144AP50876 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF144AP50876 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF144AP50876 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF144AP50876 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF144AP50876 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF144AP50876 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF144AP50876 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.88■□□□□ 0.93
RNF144AP50876 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.88■□□□□ 0.93
RNF144AP50876 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.88■□□□□ 0.93
RNF144AP50876 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF144AP50876 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF144AP50876 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF144AP50876 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF144AP50876 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF144AP50876 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF144AP50876 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF144AP50876 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF144AP50876 AL035685.1-201ENST00000636663 812 ntBASIC20.87■□□□□ 0.93
RNF144AP50876 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF144AP50876 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF144AP50876 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF144AP50876 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RNF144AP50876 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF144AP50876 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF144AP50876 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF144AP50876 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF144AP50876 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
RNF144AP50876 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.86■□□□□ 0.93
RNF144AP50876 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RNF144AP50876 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF144AP50876 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF144AP50876 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF144AP50876 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.86■□□□□ 0.93
RNF144AP50876 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF144AP50876 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF144AP50876 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF144AP50876 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF144AP50876 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
RNF144AP50876 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.85■□□□□ 0.93
RNF144AP50876 AC092028.1-203ENST00000608262 953 ntBASIC20.85■□□□□ 0.93
RNF144AP50876 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.85■□□□□ 0.93
RNF144AP50876 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms