Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
THBS3P49746 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
THBS3P49746 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS3P49746 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
THBS3P49746 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
THBS3P49746 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS3P49746 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS3P49746 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS3P49746 AC009299.2-201ENST00000482477 511 ntBASIC18.57■□□□□ 0.56
THBS3P49746 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS3P49746 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.57■□□□□ 0.56
THBS3P49746 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS3P49746 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
THBS3P49746 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
THBS3P49746 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
THBS3P49746 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THBS3P49746 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
THBS3P49746 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
THBS3P49746 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THBS3P49746 AC131274.2-201ENST00000580697 1507 ntBASIC18.56■□□□□ 0.56
THBS3P49746 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.56■□□□□ 0.56
THBS3P49746 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
THBS3P49746 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
THBS3P49746 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.56■□□□□ 0.56
THBS3P49746 AC120024.1-201ENST00000562672 995 ntBASIC18.56■□□□□ 0.56
THBS3P49746 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.56■□□□□ 0.56
THBS3P49746 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
THBS3P49746 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
THBS3P49746 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THBS3P49746 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.55■□□□□ 0.56
THBS3P49746 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS3P49746 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS3P49746 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS3P49746 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS3P49746 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS3P49746 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.55■□□□□ 0.56
THBS3P49746 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THBS3P49746 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
THBS3P49746 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
THBS3P49746 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
THBS3P49746 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
THBS3P49746 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
THBS3P49746 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
THBS3P49746 KRT18P24-201ENST00000344739 1156 ntBASIC18.54■□□□□ 0.56
THBS3P49746 AC103724.3-201ENST00000564481 992 ntBASIC18.54■□□□□ 0.56
THBS3P49746 THA1P-201ENST00000590384 1145 ntBASIC18.54■□□□□ 0.56
THBS3P49746 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
THBS3P49746 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
THBS3P49746 AC068473.5-201ENST00000616428 2072 ntBASIC18.54■□□□□ 0.56
THBS3P49746 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
THBS3P49746 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
THBS3P49746 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
THBS3P49746 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
THBS3P49746 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
THBS3P49746 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
THBS3P49746 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.53■□□□□ 0.56
THBS3P49746 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
THBS3P49746 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
THBS3P49746 AL031848.2-201ENST00000607670 837 ntBASIC18.53■□□□□ 0.56
THBS3P49746 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.53■□□□□ 0.56
THBS3P49746 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
THBS3P49746 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
THBS3P49746 ANOS2P-203ENST00000472227 1816 ntBASIC18.53■□□□□ 0.56
THBS3P49746 ALDH1A3-203ENST00000557963 1670 ntBASIC18.53■□□□□ 0.56
THBS3P49746 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
THBS3P49746 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.53■□□□□ 0.56
THBS3P49746 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
THBS3P49746 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
THBS3P49746 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
THBS3P49746 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
THBS3P49746 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
THBS3P49746 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
THBS3P49746 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.52■□□□□ 0.56
THBS3P49746 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
THBS3P49746 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
THBS3P49746 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
THBS3P49746 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.52■□□□□ 0.56
THBS3P49746 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.52■□□□□ 0.55
THBS3P49746 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.52■□□□□ 0.55
THBS3P49746 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
THBS3P49746 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
THBS3P49746 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
THBS3P49746 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
THBS3P49746 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
THBS3P49746 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.51■□□□□ 0.55
THBS3P49746 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
THBS3P49746 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.51■□□□□ 0.55
THBS3P49746 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THBS3P49746 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THBS3P49746 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
THBS3P49746 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THBS3P49746 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
THBS3P49746 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
THBS3P49746 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
THBS3P49746 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.5■□□□□ 0.55
THBS3P49746 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
THBS3P49746 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
THBS3P49746 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
THBS3P49746 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
THBS3P49746 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms