Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 YGR079WYGR079W 1113 nt5□□□□□ -1.61
UPF3P48412 ADD66YKL206C 804 nt5□□□□□ -1.61
UPF3P48412 DCC1YCL016C 1143 nt5□□□□□ -1.61
UPF3P48412 HIR2YOR038C 2628 nt5□□□□□ -1.61
UPF3P48412 RNY1YPL123C 1305 nt4.99□□□□□ -1.61
UPF3P48412 NOC4YPR144C 1659 nt4.99□□□□□ -1.61
UPF3P48412 CTR3YLR411W 726 nt4.99□□□□□ -1.61
UPF3P48412 VPS71YML041C 843 nt4.99□□□□□ -1.61
UPF3P48412 YNL234WYNL234W 1281 nt4.99□□□□□ -1.61
UPF3P48412 APM2YHL019C 1818 nt4.99□□□□□ -1.61
UPF3P48412 GAL10YBR019C 2100 nt4.99□□□□□ -1.61
UPF3P48412 ALG9YNL219C 1668 nt4.99□□□□□ -1.61
UPF3P48412 NNK1YKL171W 2787 nt4.99□□□□□ -1.61
UPF3P48412 ARP2YDL029W 1176 nt4.98□□□□□ -1.61
UPF3P48412 DAS2YDR020C 699 nt4.98□□□□□ -1.61
UPF3P48412 DOS2YDR068W 933 nt4.98□□□□□ -1.61
UPF3P48412 YHP1YDR451C 1062 nt4.98□□□□□ -1.61
UPF3P48412 FRA2YGL220W 363 nt4.98□□□□□ -1.61
UPF3P48412 CAX4YGR036C 720 nt4.98□□□□□ -1.61
UPF3P48412 RFC2YJR068W 1062 nt4.98□□□□□ -1.61
UPF3P48412 PRP45YAL032C 1140 nt4.98□□□□□ -1.61
UPF3P48412 YLR225CYLR225C 1224 nt4.98□□□□□ -1.61
UPF3P48412 YMR315WYMR315W 1050 nt4.98□□□□□ -1.61
UPF3P48412 DCI1YOR180C 816 nt4.98□□□□□ -1.61
UPF3P48412 PXA1YPL147W 2613 nt4.98□□□□□ -1.61
UPF3P48412 AVT3YKL146W 2079 nt4.98□□□□□ -1.61
UPF3P48412 FRE1YLR214W 2061 nt4.98□□□□□ -1.61
UPF3P48412 YER084WYER084W 387 nt4.97□□□□□ -1.61
UPF3P48412 ECT1YGR007W 972 nt4.97□□□□□ -1.61
UPF3P48412 NAG1YGR031C-A 492 nt4.97□□□□□ -1.61
UPF3P48412 YNG2YHR090C 849 nt4.97□□□□□ -1.61
UPF3P48412 EMG1YLR186W 759 nt4.97□□□□□ -1.61
UPF3P48412 YPL062WYPL062W 405 nt4.97□□□□□ -1.61
UPF3P48412 KTR3YBR205W 1215 nt4.97□□□□□ -1.61
UPF3P48412 RSC30YHR056C 2652 nt4.97□□□□□ -1.61
UPF3P48412 CDC48YDL126C 2508 nt4.96□□□□□ -1.61
UPF3P48412 MGS1YNL218W 1764 nt4.96□□□□□ -1.61
UPF3P48412 NOB1YOR056C 1380 nt4.96□□□□□ -1.62
UPF3P48412 CYC1YJR048W 330 nt4.96□□□□□ -1.62
UPF3P48412 MRPL13YKR006C 795 nt4.96□□□□□ -1.62
UPF3P48412 YOR034C-AYOR034C-A 243 nt4.96□□□□□ -1.62
UPF3P48412 YTA6YPL074W 2265 nt4.96□□□□□ -1.62
UPF3P48412 IME4YGL192W 1803 nt4.95□□□□□ -1.62
UPF3P48412 SUL2YLR092W 2682 nt4.95□□□□□ -1.62
UPF3P48412 YCR050CYCR050C 309 nt4.95□□□□□ -1.62
UPF3P48412 RPB7YDR404C 516 nt4.95□□□□□ -1.62
UPF3P48412 SLO1YER180C-A 258 nt4.95□□□□□ -1.62
UPF3P48412 SCL1YGL011C 759 nt4.95□□□□□ -1.62
UPF3P48412 YGR182CYGR182C 354 nt4.95□□□□□ -1.62
UPF3P48412 YKL151CYKL151C 1014 nt4.95□□□□□ -1.62
UPF3P48412 POM33YLL023C 840 nt4.95□□□□□ -1.62
UPF3P48412 YOR318CYOR318C 306 nt4.95□□□□□ -1.62
UPF3P48412 HSP82YPL240C 2130 nt4.95□□□□□ -1.62
UPF3P48412 CMR3YPR013C 954 nt4.95□□□□□ -1.62
UPF3P48412 GAS4YOL132W 1416 nt4.95□□□□□ -1.62
UPF3P48412 SOF1YLL011W 1470 nt4.94□□□□□ -1.62
UPF3P48412 ASK10YGR097W 3441 nt4.94□□□□□ -1.62
UPF3P48412 GRS1YBR121C 2004 nt4.94□□□□□ -1.62
UPF3P48412 PUS9YDL036C 1389 nt4.94□□□□□ -1.62
UPF3P48412 ARO9YHR137W 1542 nt4.94□□□□□ -1.62
UPF3P48412 MCH4YOL119C 1506 nt4.94□□□□□ -1.62
UPF3P48412 GPR1YDL035C 2886 nt4.94□□□□□ -1.62
UPF3P48412 YDR282CYDR282C 1245 nt4.94□□□□□ -1.62
UPF3P48412 YFR035CYFR035C 345 nt4.94□□□□□ -1.62
UPF3P48412 DUO1YGL061C 744 nt4.94□□□□□ -1.62
UPF3P48412 YGL194C-AYGL194C-A 243 nt4.94□□□□□ -1.62
UPF3P48412 SPL2YHR136C 447 nt4.94□□□□□ -1.62
UPF3P48412 SPO16YHR153C 597 nt4.94□□□□□ -1.62
UPF3P48412 DAL3YIR032C 588 nt4.94□□□□□ -1.62
UPF3P48412 TEF4YKL081W 1239 nt4.94□□□□□ -1.62
UPF3P48412 ETR1YBR026C 1143 nt4.94□□□□□ -1.62
UPF3P48412 TRM13YOL125W 1431 nt4.94□□□□□ -1.62
UPF3P48412 PRR1YKL116C 1557 nt4.94□□□□□ -1.62
UPF3P48412 PDI1YCL043C 1569 nt4.94□□□□□ -1.62
UPF3P48412 TEA1YOR337W 2280 nt4.94□□□□□ -1.62
UPF3P48412 THP1YOL072W 1368 nt4.93□□□□□ -1.62
UPF3P48412 RAD7YJR052W 1698 nt4.93□□□□□ -1.62
UPF3P48412 YDL012CYDL012C 324 nt4.93□□□□□ -1.62
UPF3P48412 GET3YDL100C 1065 nt4.93□□□□□ -1.62
UPF3P48412 COQ4YDR204W 1008 nt4.93□□□□□ -1.62
UPF3P48412 YFL041W-AYFL041W-A 192 nt4.93□□□□□ -1.62
UPF3P48412 RPL28YGL103W 450 nt4.93□□□□□ -1.62
UPF3P48412 ARC1YGL105W 1131 nt4.93□□□□□ -1.62
UPF3P48412 DAM1YGR113W 1032 nt4.93□□□□□ -1.62
UPF3P48412 UPS2YLR168C 693 nt4.93□□□□□ -1.62
UPF3P48412 RER2YBR002C 861 nt4.93□□□□□ -1.62
UPF3P48412 ETT1YOR051C 1239 nt4.93□□□□□ -1.62
UPF3P48412 SAM4YPL273W 978 nt4.93□□□□□ -1.62
UPF3P48412 NPL4YBR170C 1743 nt4.93□□□□□ -1.62
UPF3P48412 GPB1YOR371C 2694 nt4.93□□□□□ -1.62
UPF3P48412 MSC7YHR039C 1935 nt4.93□□□□□ -1.62
UPF3P48412 BBC1YJL020C 3474 nt4.93□□□□□ -1.62
UPF3P48412 PDR10YOR328W 4695 nt4.93□□□□□ -1.62
UPF3P48412 BUD8YLR353W 1812 nt4.93□□□□□ -1.62
UPF3P48412 PRP43YGL120C 2304 nt4.92□□□□□ -1.62
UPF3P48412 NGL3YML118W 1518 nt4.92□□□□□ -1.62
UPF3P48412 TFA1YKL028W 1449 nt4.92□□□□□ -1.62
UPF3P48412 OAF1YAL051W 3144 nt4.92□□□□□ -1.62
UPF3P48412 IWR1YDL115C 1062 nt4.92□□□□□ -1.62
UPF3P48412 SUA5YGL169W 1281 nt4.92□□□□□ -1.62
Retrieved 100 of 7,029 protein–RNA pairs in 31.3 ms