Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 DUX4L1-201ENST00000627662 1275 ntBASIC25.77■■□□□ 1.72
HOXC6P09630 DUX4L8-201ENST00000629013 1275 ntBASIC25.77■■□□□ 1.72
HOXC6P09630 DUX4L3-201ENST00000630187 1275 ntBASIC25.77■■□□□ 1.72
HOXC6P09630 DUX4L7-201ENST00000630678 1275 ntBASIC25.77■■□□□ 1.72
HOXC6P09630 DUX4L5-201ENST00000630834 1275 ntBASIC25.77■■□□□ 1.72
HOXC6P09630 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
HOXC6P09630 TSPY26P-201ENST00000476365 1326 ntBASIC25.77■■□□□ 1.72
HOXC6P09630 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.77■■□□□ 1.72
HOXC6P09630 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
HOXC6P09630 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
HOXC6P09630 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.76■■□□□ 1.71
HOXC6P09630 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
HOXC6P09630 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.76■■□□□ 1.71
HOXC6P09630 AC123595.1-201ENST00000440769 1046 ntBASIC25.76■■□□□ 1.71
HOXC6P09630 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC25.76■■□□□ 1.71
HOXC6P09630 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
HOXC6P09630 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.76■■□□□ 1.71
HOXC6P09630 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.76■■□□□ 1.71
HOXC6P09630 AL358852.1-201ENST00000623174 1268 ntBASIC25.76■■□□□ 1.71
HOXC6P09630 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
HOXC6P09630 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
HOXC6P09630 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
HOXC6P09630 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.75■■□□□ 1.71
HOXC6P09630 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.75■■□□□ 1.71
HOXC6P09630 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
HOXC6P09630 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC25.75■■□□□ 1.71
HOXC6P09630 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
HOXC6P09630 AC141586.4-201ENST00000624558 1573 ntBASIC25.75■■□□□ 1.71
HOXC6P09630 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.75■■□□□ 1.71
HOXC6P09630 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.75■■□□□ 1.71
HOXC6P09630 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.75■■□□□ 1.71
HOXC6P09630 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
HOXC6P09630 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.75■■□□□ 1.71
HOXC6P09630 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.75■■□□□ 1.71
HOXC6P09630 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
HOXC6P09630 SLC47A1P1-202ENST00000449666 945 ntBASIC25.75■■□□□ 1.71
HOXC6P09630 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.75■■□□□ 1.71
HOXC6P09630 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
HOXC6P09630 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.75■■□□□ 1.71
HOXC6P09630 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
HOXC6P09630 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
HOXC6P09630 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.74■■□□□ 1.71
HOXC6P09630 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
HOXC6P09630 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.74■■□□□ 1.71
HOXC6P09630 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC25.74■■□□□ 1.71
HOXC6P09630 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
HOXC6P09630 AL137784.2-201ENST00000607332 1000 ntBASIC25.74■■□□□ 1.71
HOXC6P09630 AC092437.1-201ENST00000624794 1048 ntBASIC25.74■■□□□ 1.71
HOXC6P09630 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
HOXC6P09630 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
HOXC6P09630 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.74■■□□□ 1.71
HOXC6P09630 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
HOXC6P09630 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
HOXC6P09630 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
HOXC6P09630 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.73■■□□□ 1.71
HOXC6P09630 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
HOXC6P09630 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.73■■□□□ 1.71
HOXC6P09630 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.73■■□□□ 1.71
HOXC6P09630 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.73■■□□□ 1.71
HOXC6P09630 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.73■■□□□ 1.71
HOXC6P09630 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.73■■□□□ 1.71
HOXC6P09630 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
HOXC6P09630 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
HOXC6P09630 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
HOXC6P09630 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
HOXC6P09630 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
HOXC6P09630 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.72■■□□□ 1.71
HOXC6P09630 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.72■■□□□ 1.71
HOXC6P09630 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
HOXC6P09630 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
HOXC6P09630 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
HOXC6P09630 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
HOXC6P09630 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
HOXC6P09630 IGHV3-19-201ENST00000521488 291 ntBASIC25.72■■□□□ 1.71
HOXC6P09630 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
HOXC6P09630 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
HOXC6P09630 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.72■■□□□ 1.71
HOXC6P09630 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
HOXC6P09630 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
HOXC6P09630 MIR572-201ENST00000384983 95 ntBASIC25.71■■□□□ 1.71
HOXC6P09630 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
HOXC6P09630 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.71■■□□□ 1.71
HOXC6P09630 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
HOXC6P09630 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC25.71■■□□□ 1.71
HOXC6P09630 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.71
HOXC6P09630 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
HOXC6P09630 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
HOXC6P09630 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.7■■□□□ 1.7
HOXC6P09630 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.7■■□□□ 1.7
HOXC6P09630 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.7■■□□□ 1.7
HOXC6P09630 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
HOXC6P09630 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.7■■□□□ 1.7
HOXC6P09630 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC25.7■■□□□ 1.7
HOXC6P09630 ALDH1A3-203ENST00000557963 1670 ntBASIC25.7■■□□□ 1.7
HOXC6P09630 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
HOXC6P09630 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
HOXC6P09630 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.69■■□□□ 1.7
HOXC6P09630 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
HOXC6P09630 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
HOXC6P09630 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms