Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
THBS1P07996 C9orf163-202ENST00000624034 2573 ntBASIC20.79■□□□□ 0.92
THBS1P07996 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
THBS1P07996 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.79■□□□□ 0.92
THBS1P07996 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.79■□□□□ 0.92
THBS1P07996 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
THBS1P07996 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
THBS1P07996 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.79■□□□□ 0.92
THBS1P07996 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
THBS1P07996 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
THBS1P07996 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
THBS1P07996 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
THBS1P07996 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
THBS1P07996 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
THBS1P07996 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
THBS1P07996 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
THBS1P07996 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.78■□□□□ 0.92
THBS1P07996 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
THBS1P07996 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.78■□□□□ 0.92
THBS1P07996 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.78■□□□□ 0.92
THBS1P07996 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
THBS1P07996 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
THBS1P07996 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.78■□□□□ 0.92
THBS1P07996 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.78■□□□□ 0.92
THBS1P07996 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.78■□□□□ 0.92
THBS1P07996 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.78■□□□□ 0.92
THBS1P07996 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.78■□□□□ 0.92
THBS1P07996 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
THBS1P07996 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
THBS1P07996 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
THBS1P07996 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
THBS1P07996 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
THBS1P07996 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.77■□□□□ 0.92
THBS1P07996 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
THBS1P07996 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
THBS1P07996 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
THBS1P07996 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.77■□□□□ 0.92
THBS1P07996 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.77■□□□□ 0.92
THBS1P07996 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
THBS1P07996 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.77■□□□□ 0.92
THBS1P07996 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
THBS1P07996 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
THBS1P07996 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.77■□□□□ 0.92
THBS1P07996 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.77■□□□□ 0.92
THBS1P07996 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
THBS1P07996 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
THBS1P07996 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
THBS1P07996 AC021242.3-201ENST00000607598 1377 ntBASIC20.76■□□□□ 0.91
THBS1P07996 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.76■□□□□ 0.91
THBS1P07996 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.76■□□□□ 0.91
THBS1P07996 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
THBS1P07996 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
THBS1P07996 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
THBS1P07996 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
THBS1P07996 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.76■□□□□ 0.91
THBS1P07996 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
THBS1P07996 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
THBS1P07996 AC079630.1-202ENST00000618127 1840 ntBASIC20.76■□□□□ 0.91
THBS1P07996 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
THBS1P07996 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
THBS1P07996 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
THBS1P07996 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
THBS1P07996 BX664725.1-201ENST00000438252 379 ntBASIC20.75■□□□□ 0.91
THBS1P07996 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.75■□□□□ 0.91
THBS1P07996 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
THBS1P07996 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.75■□□□□ 0.91
THBS1P07996 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
THBS1P07996 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
THBS1P07996 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
THBS1P07996 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
THBS1P07996 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
THBS1P07996 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
THBS1P07996 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
THBS1P07996 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
THBS1P07996 MIR6722-201ENST00000617286 78 ntBASIC20.74■□□□□ 0.91
THBS1P07996 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
THBS1P07996 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
THBS1P07996 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
THBS1P07996 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
THBS1P07996 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
THBS1P07996 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
THBS1P07996 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.73■□□□□ 0.91
THBS1P07996 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
THBS1P07996 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
THBS1P07996 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
THBS1P07996 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.73■□□□□ 0.91
THBS1P07996 AC009299.2-201ENST00000482477 511 ntBASIC20.73■□□□□ 0.91
THBS1P07996 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
THBS1P07996 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.73■□□□□ 0.91
THBS1P07996 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
THBS1P07996 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.73■□□□□ 0.91
THBS1P07996 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.73■□□□□ 0.91
THBS1P07996 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
THBS1P07996 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.72■□□□□ 0.91
THBS1P07996 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
THBS1P07996 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
THBS1P07996 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.72■□□□□ 0.91
THBS1P07996 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
THBS1P07996 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.72■□□□□ 0.91
THBS1P07996 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms