Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
TRGV3P03979 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV3P03979 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV3P03979 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV3P03979 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV3P03979 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV3P03979 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.71■□□□□ 0.43
TRGV3P03979 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.71■□□□□ 0.43
TRGV3P03979 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV3P03979 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRGV3P03979 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.71■□□□□ 0.43
TRGV3P03979 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRGV3P03979 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TRGV3P03979 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRGV3P03979 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRGV3P03979 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRGV3P03979 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRGV3P03979 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.7■□□□□ 0.42
TRGV3P03979 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRGV3P03979 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.7■□□□□ 0.42
TRGV3P03979 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRGV3P03979 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRGV3P03979 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.7■□□□□ 0.42
TRGV3P03979 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.7■□□□□ 0.42
TRGV3P03979 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRGV3P03979 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.7■□□□□ 0.42
TRGV3P03979 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRGV3P03979 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRGV3P03979 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRGV3P03979 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRGV3P03979 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRGV3P03979 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.69■□□□□ 0.42
TRGV3P03979 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRGV3P03979 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRGV3P03979 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TRGV3P03979 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
TRGV3P03979 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TRGV3P03979 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.68■□□□□ 0.42
TRGV3P03979 AL356740.2-201ENST00000601559 647 ntBASIC17.68■□□□□ 0.42
TRGV3P03979 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV3P03979 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRGV3P03979 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRGV3P03979 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV3P03979 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRGV3P03979 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV3P03979 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV3P03979 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRGV3P03979 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.67■□□□□ 0.42
TRGV3P03979 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.67■□□□□ 0.42
TRGV3P03979 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV3P03979 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV3P03979 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV3P03979 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.67■□□□□ 0.42
TRGV3P03979 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV3P03979 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV3P03979 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV3P03979 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV3P03979 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV3P03979 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV3P03979 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRGV3P03979 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV3P03979 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.67■□□□□ 0.42
TRGV3P03979 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRGV3P03979 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.66■□□□□ 0.42
TRGV3P03979 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV3P03979 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV3P03979 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV3P03979 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.66■□□□□ 0.42
TRGV3P03979 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV3P03979 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV3P03979 AC131212.1-201ENST00000613771 668 ntBASIC17.66■□□□□ 0.42
TRGV3P03979 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRGV3P03979 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.66■□□□□ 0.42
TRGV3P03979 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV3P03979 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRGV3P03979 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
TRGV3P03979 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV3P03979 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV3P03979 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV3P03979 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV3P03979 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.65■□□□□ 0.42
TRGV3P03979 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.65■□□□□ 0.42
TRGV3P03979 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.65■□□□□ 0.42
TRGV3P03979 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.65■□□□□ 0.42
TRGV3P03979 AL117332.1-201ENST00000622628 974 ntBASIC17.65■□□□□ 0.42
TRGV3P03979 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV3P03979 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.65■□□□□ 0.42
TRGV3P03979 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRGV3P03979 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRGV3P03979 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.65■□□□□ 0.42
TRGV3P03979 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV3P03979 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.64■□□□□ 0.41
TRGV3P03979 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV3P03979 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV3P03979 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.64■□□□□ 0.41
TRGV3P03979 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV3P03979 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TRGV3P03979 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV3P03979 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.63■□□□□ 0.41
TRGV3P03979 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms