Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RAB3DO95716 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3DO95716 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3DO95716 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3DO95716 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB3DO95716 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3DO95716 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RAB3DO95716 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RAB3DO95716 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3DO95716 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3DO95716 ZNRF2P2-203ENST00000454624 420 ntBASIC19.16■□□□□ 0.66
RAB3DO95716 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.16■□□□□ 0.66
RAB3DO95716 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB3DO95716 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3DO95716 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3DO95716 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3DO95716 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB3DO95716 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3DO95716 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB3DO95716 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
RAB3DO95716 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB3DO95716 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3DO95716 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3DO95716 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3DO95716 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3DO95716 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3DO95716 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
RAB3DO95716 AC093536.1-201ENST00000569153 554 ntBASIC19.15■□□□□ 0.66
RAB3DO95716 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3DO95716 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3DO95716 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3DO95716 ESRRAP2-201ENST00000418437 1549 ntBASIC19.15■□□□□ 0.66
RAB3DO95716 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB3DO95716 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB3DO95716 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.14■□□□□ 0.66
RAB3DO95716 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RAB3DO95716 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RAB3DO95716 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.14■□□□□ 0.65
RAB3DO95716 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3DO95716 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3DO95716 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.14■□□□□ 0.65
RAB3DO95716 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.14■□□□□ 0.65
RAB3DO95716 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3DO95716 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3DO95716 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RAB3DO95716 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.13■□□□□ 0.65
RAB3DO95716 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB3DO95716 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB3DO95716 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.13■□□□□ 0.65
RAB3DO95716 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
RAB3DO95716 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB3DO95716 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.13■□□□□ 0.65
RAB3DO95716 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.13■□□□□ 0.65
RAB3DO95716 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB3DO95716 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB3DO95716 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.12■□□□□ 0.65
RAB3DO95716 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.12■□□□□ 0.65
RAB3DO95716 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB3DO95716 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RAB3DO95716 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.12■□□□□ 0.65
RAB3DO95716 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RAB3DO95716 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.12■□□□□ 0.65
RAB3DO95716 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RAB3DO95716 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.11■□□□□ 0.65
RAB3DO95716 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3DO95716 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3DO95716 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3DO95716 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.11■□□□□ 0.65
RAB3DO95716 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3DO95716 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3DO95716 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.11■□□□□ 0.65
RAB3DO95716 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3DO95716 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3DO95716 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.11■□□□□ 0.65
RAB3DO95716 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB3DO95716 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3DO95716 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3DO95716 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB3DO95716 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
RAB3DO95716 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3DO95716 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3DO95716 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3DO95716 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3DO95716 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.1■□□□□ 0.65
RAB3DO95716 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.1■□□□□ 0.65
RAB3DO95716 AC092296.2-201ENST00000589470 999 ntBASIC19.1■□□□□ 0.65
RAB3DO95716 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3DO95716 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3DO95716 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3DO95716 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
RAB3DO95716 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB3DO95716 AL137060.1-201ENST00000618151 2648 ntBASIC19.1■□□□□ 0.65
RAB3DO95716 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RAB3DO95716 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.1■□□□□ 0.65
RAB3DO95716 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.1■□□□□ 0.65
RAB3DO95716 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
RAB3DO95716 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3DO95716 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB3DO95716 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.09■□□□□ 0.65
RAB3DO95716 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms