Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.26■■□□□ 1.47
CSPG5O95196 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.26■■□□□ 1.47
CSPG5O95196 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.26■■□□□ 1.47
CSPG5O95196 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.26■■□□□ 1.47
CSPG5O95196 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CSPG5O95196 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.26■■□□□ 1.47
CSPG5O95196 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CSPG5O95196 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CSPG5O95196 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.25■■□□□ 1.47
CSPG5O95196 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CSPG5O95196 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.25■■□□□ 1.47
CSPG5O95196 AC004911.1-201ENST00000416316 871 ntBASIC24.25■■□□□ 1.47
CSPG5O95196 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.25■■□□□ 1.47
CSPG5O95196 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CSPG5O95196 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CSPG5O95196 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.24■■□□□ 1.47
CSPG5O95196 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
CSPG5O95196 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.24■■□□□ 1.47
CSPG5O95196 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.24■■□□□ 1.47
CSPG5O95196 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.24■■□□□ 1.47
CSPG5O95196 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
CSPG5O95196 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CSPG5O95196 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CSPG5O95196 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CSPG5O95196 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.23■■□□□ 1.47
CSPG5O95196 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CSPG5O95196 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.23■■□□□ 1.47
CSPG5O95196 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
CSPG5O95196 AC092437.1-201ENST00000624794 1048 ntBASIC24.23■■□□□ 1.47
CSPG5O95196 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CSPG5O95196 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CSPG5O95196 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.23■■□□□ 1.47
CSPG5O95196 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CSPG5O95196 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.22■■□□□ 1.47
CSPG5O95196 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.22■■□□□ 1.47
CSPG5O95196 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.22■■□□□ 1.47
CSPG5O95196 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CSPG5O95196 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CSPG5O95196 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CSPG5O95196 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
CSPG5O95196 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CSPG5O95196 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.22■■□□□ 1.47
CSPG5O95196 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
CSPG5O95196 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.22■■□□□ 1.47
CSPG5O95196 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.22■■□□□ 1.47
CSPG5O95196 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
CSPG5O95196 DUX4L2-201ENST00000561772 1275 ntBASIC24.22■■□□□ 1.47
CSPG5O95196 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CSPG5O95196 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.22■■□□□ 1.47
CSPG5O95196 DUX4L6-201ENST00000626483 1275 ntBASIC24.22■■□□□ 1.47
CSPG5O95196 DUX4L1-201ENST00000627662 1275 ntBASIC24.22■■□□□ 1.47
CSPG5O95196 DUX4L8-201ENST00000629013 1275 ntBASIC24.22■■□□□ 1.47
CSPG5O95196 DUX4L3-201ENST00000630187 1275 ntBASIC24.22■■□□□ 1.47
CSPG5O95196 DUX4L7-201ENST00000630678 1275 ntBASIC24.22■■□□□ 1.47
CSPG5O95196 DUX4L5-201ENST00000630834 1275 ntBASIC24.22■■□□□ 1.47
CSPG5O95196 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CSPG5O95196 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CSPG5O95196 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CSPG5O95196 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.21■■□□□ 1.47
CSPG5O95196 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CSPG5O95196 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CSPG5O95196 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CSPG5O95196 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.21■■□□□ 1.47
CSPG5O95196 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CSPG5O95196 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.21■■□□□ 1.47
CSPG5O95196 YBX1P1-201ENST00000445822 960 ntBASIC24.21■■□□□ 1.47
CSPG5O95196 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.21■■□□□ 1.47
CSPG5O95196 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CSPG5O95196 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.21■■□□□ 1.47
CSPG5O95196 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.47
CSPG5O95196 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.47
CSPG5O95196 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CSPG5O95196 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CSPG5O95196 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CSPG5O95196 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CSPG5O95196 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CSPG5O95196 SLC47A1P1-202ENST00000449666 945 ntBASIC24.2■■□□□ 1.46
CSPG5O95196 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.2■■□□□ 1.46
CSPG5O95196 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.2■■□□□ 1.46
CSPG5O95196 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CSPG5O95196 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
CSPG5O95196 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CSPG5O95196 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
CSPG5O95196 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CSPG5O95196 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
CSPG5O95196 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.19■■□□□ 1.46
CSPG5O95196 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.19■■□□□ 1.46
CSPG5O95196 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.19■■□□□ 1.46
CSPG5O95196 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
CSPG5O95196 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.19■■□□□ 1.46
CSPG5O95196 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.19■■□□□ 1.46
CSPG5O95196 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.19■■□□□ 1.46
CSPG5O95196 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.19■■□□□ 1.46
CSPG5O95196 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
CSPG5O95196 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CSPG5O95196 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CSPG5O95196 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.18■■□□□ 1.46
CSPG5O95196 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CSPG5O95196 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CSPG5O95196 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.18■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms