Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.16■□□□□ 0.82
UBL3O95164 AC021242.3-201ENST00000607598 1377 ntBASIC20.16■□□□□ 0.82
UBL3O95164 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
UBL3O95164 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UBL3O95164 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBL3O95164 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.15■□□□□ 0.82
UBL3O95164 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
UBL3O95164 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
UBL3O95164 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
UBL3O95164 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBL3O95164 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBL3O95164 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
UBL3O95164 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.15■□□□□ 0.82
UBL3O95164 AC239859.2-201ENST00000444165 318 ntBASIC20.15■□□□□ 0.82
UBL3O95164 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.15■□□□□ 0.82
UBL3O95164 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.15■□□□□ 0.82
UBL3O95164 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBL3O95164 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBL3O95164 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
UBL3O95164 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBL3O95164 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.14■□□□□ 0.81
UBL3O95164 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBL3O95164 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBL3O95164 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
UBL3O95164 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.14■□□□□ 0.81
UBL3O95164 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
UBL3O95164 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBL3O95164 AC233723.2-201ENST00000623798 2106 ntBASIC20.14■□□□□ 0.81
UBL3O95164 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
UBL3O95164 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBL3O95164 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBL3O95164 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBL3O95164 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBL3O95164 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.13■□□□□ 0.81
UBL3O95164 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBL3O95164 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBL3O95164 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.12■□□□□ 0.81
UBL3O95164 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBL3O95164 MIR4787-201ENST00000607364 84 ntBASIC20.12■□□□□ 0.81
UBL3O95164 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.12■□□□□ 0.81
UBL3O95164 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBL3O95164 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.12■□□□□ 0.81
UBL3O95164 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBL3O95164 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBL3O95164 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBL3O95164 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBL3O95164 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.12■□□□□ 0.81
UBL3O95164 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBL3O95164 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.11■□□□□ 0.81
UBL3O95164 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.11■□□□□ 0.81
UBL3O95164 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBL3O95164 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBL3O95164 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBL3O95164 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBL3O95164 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBL3O95164 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
UBL3O95164 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBL3O95164 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.11■□□□□ 0.81
UBL3O95164 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBL3O95164 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBL3O95164 LINC00565-201ENST00000562710 2331 ntBASIC20.11■□□□□ 0.81
UBL3O95164 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
UBL3O95164 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBL3O95164 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
UBL3O95164 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBL3O95164 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.11■□□□□ 0.81
UBL3O95164 AC131274.2-201ENST00000580697 1507 ntBASIC20.11■□□□□ 0.81
UBL3O95164 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBL3O95164 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.1■□□□□ 0.81
UBL3O95164 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.1■□□□□ 0.81
UBL3O95164 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.1■□□□□ 0.81
UBL3O95164 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBL3O95164 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBL3O95164 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
UBL3O95164 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.1■□□□□ 0.81
UBL3O95164 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBL3O95164 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBL3O95164 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBL3O95164 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
UBL3O95164 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBL3O95164 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBL3O95164 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.09■□□□□ 0.81
UBL3O95164 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.09■□□□□ 0.81
UBL3O95164 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBL3O95164 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.09■□□□□ 0.81
UBL3O95164 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.09■□□□□ 0.81
UBL3O95164 AC004448.1-201ENST00000458332 883 ntBASIC20.09■□□□□ 0.81
UBL3O95164 EP400NL-214ENST00000641289 2402 ntBASIC20.09■□□□□ 0.81
UBL3O95164 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBL3O95164 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBL3O95164 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBL3O95164 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.09■□□□□ 0.81
UBL3O95164 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
UBL3O95164 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBL3O95164 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UBL3O95164 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
UBL3O95164 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.08■□□□□ 0.81
UBL3O95164 AC092028.1-203ENST00000608262 953 ntBASIC20.08■□□□□ 0.81
UBL3O95164 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
UBL3O95164 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms