Protein–RNA interactions for Protein: O75569

PRKRA, Interferon-inducible double-stranded RNA-dependent protein kinase activator A, humanhuman

Known RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKRAO75569 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRKRAO75569 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.38■■□□□ 1.01
PRKRAO75569 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PRKRAO75569 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PRKRAO75569 KRT16P3-201ENST00000439127 1283 ntBASIC21.37■■□□□ 1.01
PRKRAO75569 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PRKRAO75569 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.37■■□□□ 1.01
PRKRAO75569 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.37■■□□□ 1.01
PRKRAO75569 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.37■■□□□ 1.01
PRKRAO75569 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRKRAO75569 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.37■■□□□ 1.01
PRKRAO75569 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRKRAO75569 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PRKRAO75569 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRKRAO75569 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRKRAO75569 AC005703.6-201ENST00000623265 1329 ntBASIC21.36■■□□□ 1.01
PRKRAO75569 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRKRAO75569 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRKRAO75569 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRKRAO75569 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRKRAO75569 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.35■■□□□ 1.01
PRKRAO75569 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PRKRAO75569 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PRKRAO75569 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PRKRAO75569 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.35■■□□□ 1.01
PRKRAO75569 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PRKRAO75569 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.35■■□□□ 1.01
PRKRAO75569 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRKRAO75569 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRKRAO75569 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PRKRAO75569 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PRKRAO75569 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.34■■□□□ 1.01
PRKRAO75569 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRKRAO75569 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.34■■□□□ 1.01
PRKRAO75569 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.34■■□□□ 1.01
PRKRAO75569 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.34■■□□□ 1.01
PRKRAO75569 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PRKRAO75569 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRKRAO75569 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.34■■□□□ 1.01
PRKRAO75569 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRKRAO75569 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRKRAO75569 C9orf163-202ENST00000624034 2573 ntBASIC21.34■■□□□ 1.01
PRKRAO75569 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.33■■□□□ 1.01
PRKRAO75569 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRKRAO75569 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PRKRAO75569 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PRKRAO75569 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PRKRAO75569 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.33■■□□□ 1.01
PRKRAO75569 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.33■■□□□ 1.01
PRKRAO75569 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRKRAO75569 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.33■■□□□ 1.01
PRKRAO75569 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRKRAO75569 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.33■■□□□ 1
PRKRAO75569 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PRKRAO75569 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRKRAO75569 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.32■■□□□ 1
PRKRAO75569 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.32■■□□□ 1
PRKRAO75569 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRKRAO75569 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRKRAO75569 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PRKRAO75569 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRKRAO75569 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PRKRAO75569 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRKRAO75569 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRKRAO75569 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PRKRAO75569 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.32■■□□□ 1
PRKRAO75569 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PRKRAO75569 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRKRAO75569 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRKRAO75569 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.31■■□□□ 1
PRKRAO75569 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PRKRAO75569 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PRKRAO75569 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.31■■□□□ 1
PRKRAO75569 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.31■■□□□ 1
PRKRAO75569 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.31■■□□□ 1
PRKRAO75569 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PRKRAO75569 DUSP8P5-201ENST00000422884 1815 ntBASIC21.31■■□□□ 1
PRKRAO75569 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
PRKRAO75569 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PRKRAO75569 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PRKRAO75569 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.3■■□□□ 1
PRKRAO75569 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
PRKRAO75569 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PRKRAO75569 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PRKRAO75569 AC079630.1-202ENST00000618127 1840 ntBASIC21.3■■□□□ 1
PRKRAO75569 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRKRAO75569 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PRKRAO75569 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
PRKRAO75569 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.3■■□□□ 1
PRKRAO75569 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.3■■□□□ 1
PRKRAO75569 MIR6724-1-201ENST00000616420 92 ntBASIC21.3■■□□□ 1
PRKRAO75569 MIR6724-2-201ENST00000616483 92 ntBASIC21.3■■□□□ 1
PRKRAO75569 MIR6724-4-201ENST00000617390 92 ntBASIC21.3■■□□□ 1
PRKRAO75569 MIR6724-3-201ENST00000622482 92 ntBASIC21.3■■□□□ 1
PRKRAO75569 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PRKRAO75569 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PRKRAO75569 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PRKRAO75569 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PRKRAO75569 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PRKRAO75569 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms