Protein–RNA interactions for Protein: O75317

USP12, Ubiquitin carboxyl-terminal hydrolase 12, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP12O75317 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP12O75317 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USP12O75317 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.06■■□□□ 1.28
USP12O75317 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.06■■□□□ 1.28
USP12O75317 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
USP12O75317 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.05■■□□□ 1.28
USP12O75317 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP12O75317 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.05■■□□□ 1.28
USP12O75317 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP12O75317 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP12O75317 AC137630.3-201ENST00000607245 391 ntBASIC23.05■■□□□ 1.28
USP12O75317 AC133561.1-201ENST00000568600 2415 ntBASIC23.05■■□□□ 1.28
USP12O75317 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP12O75317 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP12O75317 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
USP12O75317 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
USP12O75317 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP12O75317 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP12O75317 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.04■■□□□ 1.28
USP12O75317 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.04■■□□□ 1.28
USP12O75317 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
USP12O75317 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.03■■□□□ 1.28
USP12O75317 ANOS2P-203ENST00000472227 1816 ntBASIC23.03■■□□□ 1.28
USP12O75317 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP12O75317 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.03■■□□□ 1.28
USP12O75317 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.03■■□□□ 1.28
USP12O75317 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
USP12O75317 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP12O75317 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
USP12O75317 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.02■■□□□ 1.28
USP12O75317 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.02■■□□□ 1.28
USP12O75317 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
USP12O75317 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
USP12O75317 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
USP12O75317 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
USP12O75317 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
USP12O75317 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.01■■□□□ 1.27
USP12O75317 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.01■■□□□ 1.27
USP12O75317 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP12O75317 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP12O75317 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.01■■□□□ 1.27
USP12O75317 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.01■■□□□ 1.27
USP12O75317 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.01■■□□□ 1.27
USP12O75317 SNX5-217ENST00000606557 1087 ntBASIC23.01■■□□□ 1.27
USP12O75317 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.01■■□□□ 1.27
USP12O75317 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
USP12O75317 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP12O75317 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
USP12O75317 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
USP12O75317 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23■■□□□ 1.27
USP12O75317 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23■■□□□ 1.27
USP12O75317 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23■■□□□ 1.27
USP12O75317 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23■■□□□ 1.27
USP12O75317 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23■■□□□ 1.27
USP12O75317 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
USP12O75317 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
USP12O75317 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23■■□□□ 1.27
USP12O75317 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23■■□□□ 1.27
USP12O75317 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23■■□□□ 1.27
USP12O75317 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23■■□□□ 1.27
USP12O75317 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
USP12O75317 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
USP12O75317 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.99■■□□□ 1.27
USP12O75317 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.99■■□□□ 1.27
USP12O75317 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
USP12O75317 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
USP12O75317 AC021242.3-201ENST00000607598 1377 ntBASIC22.99■■□□□ 1.27
USP12O75317 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
USP12O75317 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
USP12O75317 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
USP12O75317 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
USP12O75317 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.98■■□□□ 1.27
USP12O75317 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
USP12O75317 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
USP12O75317 MIR638-201ENST00000385237 100 ntBASIC22.98■■□□□ 1.27
USP12O75317 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
USP12O75317 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
USP12O75317 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.98■■□□□ 1.27
USP12O75317 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
USP12O75317 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
USP12O75317 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
USP12O75317 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
USP12O75317 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
USP12O75317 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
USP12O75317 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
USP12O75317 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
USP12O75317 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.96■■□□□ 1.27
USP12O75317 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
USP12O75317 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
USP12O75317 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
USP12O75317 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.96■■□□□ 1.27
USP12O75317 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.96■■□□□ 1.27
USP12O75317 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.96■■□□□ 1.27
USP12O75317 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
USP12O75317 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.96■■□□□ 1.27
USP12O75317 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
USP12O75317 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.96■■□□□ 1.27
USP12O75317 AC068473.5-201ENST00000616428 2072 ntBASIC22.96■■□□□ 1.27
USP12O75317 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
USP12O75317 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms