Protein–RNA interactions for Protein: O60763

USO1, General vesicular transport factor p115, humanhuman

Known RBP Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USO1O60763 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
USO1O60763 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
USO1O60763 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
USO1O60763 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
USO1O60763 AC131281.2-201ENST00000520478 145 ntBASIC25.29■■□□□ 1.64
USO1O60763 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.29■■□□□ 1.64
USO1O60763 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.29■■□□□ 1.64
USO1O60763 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.29■■□□□ 1.64
USO1O60763 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.29■■□□□ 1.64
USO1O60763 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
USO1O60763 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
USO1O60763 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
USO1O60763 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
USO1O60763 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.28■■□□□ 1.64
USO1O60763 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.28■■□□□ 1.64
USO1O60763 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.28■■□□□ 1.64
USO1O60763 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.28■■□□□ 1.64
USO1O60763 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
USO1O60763 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
USO1O60763 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
USO1O60763 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.28■■□□□ 1.64
USO1O60763 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.28■■□□□ 1.64
USO1O60763 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.28■■□□□ 1.64
USO1O60763 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
USO1O60763 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
USO1O60763 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
USO1O60763 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.28■■□□□ 1.64
USO1O60763 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
USO1O60763 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
USO1O60763 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.27■■□□□ 1.64
USO1O60763 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.27■■□□□ 1.64
USO1O60763 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
USO1O60763 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
USO1O60763 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.27■■□□□ 1.64
USO1O60763 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.27■■□□□ 1.64
USO1O60763 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
USO1O60763 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
USO1O60763 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
USO1O60763 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
USO1O60763 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
USO1O60763 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
USO1O60763 ABCB10P4-201ENST00000566803 2184 ntBASIC25.27■■□□□ 1.64
USO1O60763 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
USO1O60763 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
USO1O60763 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
USO1O60763 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
USO1O60763 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
USO1O60763 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
USO1O60763 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.26■■□□□ 1.63
USO1O60763 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
USO1O60763 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
USO1O60763 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
USO1O60763 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
USO1O60763 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
USO1O60763 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
USO1O60763 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
USO1O60763 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
USO1O60763 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
USO1O60763 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
USO1O60763 AL512631.2-201ENST00000604634 923 ntBASIC25.25■■□□□ 1.63
USO1O60763 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.25■■□□□ 1.63
USO1O60763 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
USO1O60763 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.24■■□□□ 1.63
USO1O60763 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
USO1O60763 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
USO1O60763 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
USO1O60763 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.24■■□□□ 1.63
USO1O60763 AC008406.3-201ENST00000620001 1374 ntBASIC25.24■■□□□ 1.63
USO1O60763 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
USO1O60763 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.24■■□□□ 1.63
USO1O60763 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.24■■□□□ 1.63
USO1O60763 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
USO1O60763 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
USO1O60763 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
USO1O60763 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
USO1O60763 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
USO1O60763 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.22■■□□□ 1.63
USO1O60763 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
USO1O60763 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
USO1O60763 MIR4466-201ENST00000606121 54 ntBASIC25.22■■□□□ 1.63
USO1O60763 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.22■■□□□ 1.63
USO1O60763 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
USO1O60763 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
USO1O60763 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
USO1O60763 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
USO1O60763 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
USO1O60763 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.21■■□□□ 1.63
USO1O60763 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
USO1O60763 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
USO1O60763 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
USO1O60763 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
USO1O60763 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
USO1O60763 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.2■■□□□ 1.62
USO1O60763 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
USO1O60763 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
USO1O60763 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
USO1O60763 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
USO1O60763 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.2■■□□□ 1.62
USO1O60763 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
USO1O60763 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms