Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AL117332.1-201ENST00000622628 974 ntBASIC20.99■□□□□ 0.95
HCN1O60741 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.99■□□□□ 0.95
HCN1O60741 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HCN1O60741 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HCN1O60741 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
HCN1O60741 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.98■□□□□ 0.95
HCN1O60741 MIR3621-201ENST00000580529 85 ntBASIC20.98■□□□□ 0.95
HCN1O60741 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HCN1O60741 AL356740.2-201ENST00000601559 647 ntBASIC20.98■□□□□ 0.95
HCN1O60741 SNX5-217ENST00000606557 1087 ntBASIC20.98■□□□□ 0.95
HCN1O60741 MIR6722-201ENST00000617286 78 ntBASIC20.98■□□□□ 0.95
HCN1O60741 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.98■□□□□ 0.95
HCN1O60741 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HCN1O60741 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HCN1O60741 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
HCN1O60741 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
HCN1O60741 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
HCN1O60741 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HCN1O60741 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.97■□□□□ 0.95
HCN1O60741 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.97■□□□□ 0.95
HCN1O60741 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.97■□□□□ 0.95
HCN1O60741 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.97■□□□□ 0.95
HCN1O60741 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HCN1O60741 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HCN1O60741 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HCN1O60741 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HCN1O60741 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HCN1O60741 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HCN1O60741 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.95■□□□□ 0.94
HCN1O60741 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HCN1O60741 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HCN1O60741 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.95■□□□□ 0.94
HCN1O60741 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HCN1O60741 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HCN1O60741 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.95■□□□□ 0.94
HCN1O60741 DUSP8P5-201ENST00000422884 1815 ntBASIC20.94■□□□□ 0.94
HCN1O60741 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HCN1O60741 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.94■□□□□ 0.94
HCN1O60741 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HCN1O60741 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HCN1O60741 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HCN1O60741 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HCN1O60741 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HCN1O60741 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.94■□□□□ 0.94
HCN1O60741 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.94■□□□□ 0.94
HCN1O60741 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HCN1O60741 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCN1O60741 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCN1O60741 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCN1O60741 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCN1O60741 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.93■□□□□ 0.94
HCN1O60741 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCN1O60741 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.93■□□□□ 0.94
HCN1O60741 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.93■□□□□ 0.94
HCN1O60741 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCN1O60741 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCN1O60741 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCN1O60741 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HCN1O60741 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.93■□□□□ 0.94
HCN1O60741 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HCN1O60741 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HCN1O60741 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.92■□□□□ 0.94
HCN1O60741 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HCN1O60741 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.92■□□□□ 0.94
HCN1O60741 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
HCN1O60741 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.92■□□□□ 0.94
HCN1O60741 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.92■□□□□ 0.94
HCN1O60741 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.92■□□□□ 0.94
HCN1O60741 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HCN1O60741 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
HCN1O60741 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HCN1O60741 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HCN1O60741 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HCN1O60741 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCN1O60741 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCN1O60741 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCN1O60741 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCN1O60741 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HCN1O60741 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HCN1O60741 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCN1O60741 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCN1O60741 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCN1O60741 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCN1O60741 AC131281.2-201ENST00000520478 145 ntBASIC20.91■□□□□ 0.94
HCN1O60741 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCN1O60741 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.91■□□□□ 0.94
HCN1O60741 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.91■□□□□ 0.94
HCN1O60741 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HCN1O60741 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.9■□□□□ 0.94
HCN1O60741 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCN1O60741 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HCN1O60741 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCN1O60741 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HCN1O60741 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HCN1O60741 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.9■□□□□ 0.94
HCN1O60741 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.9■□□□□ 0.94
HCN1O60741 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.9■□□□□ 0.94
HCN1O60741 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCN1O60741 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HCN1O60741 AC004448.1-201ENST00000458332 883 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms