Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TSPAN3O60637 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TSPAN3O60637 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
TSPAN3O60637 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
TSPAN3O60637 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TSPAN3O60637 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TSPAN3O60637 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TSPAN3O60637 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TSPAN3O60637 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TSPAN3O60637 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TSPAN3O60637 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.3■■□□□ 1.32
TSPAN3O60637 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.3■■□□□ 1.32
TSPAN3O60637 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TSPAN3O60637 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.3■■□□□ 1.32
TSPAN3O60637 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
TSPAN3O60637 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TSPAN3O60637 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TSPAN3O60637 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
TSPAN3O60637 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TSPAN3O60637 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TSPAN3O60637 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TSPAN3O60637 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.29■■□□□ 1.32
TSPAN3O60637 AC024257.2-201ENST00000549699 147 ntBASIC23.29■■□□□ 1.32
TSPAN3O60637 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TSPAN3O60637 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TSPAN3O60637 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TSPAN3O60637 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.28■■□□□ 1.32
TSPAN3O60637 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.28■■□□□ 1.32
TSPAN3O60637 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
TSPAN3O60637 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
TSPAN3O60637 AC005837.3-201ENST00000612163 286 ntBASIC23.28■■□□□ 1.32
TSPAN3O60637 AC106739.1-201ENST00000617035 715 ntBASIC23.28■■□□□ 1.32
TSPAN3O60637 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
TSPAN3O60637 SYT6-210ENST00000641643 1587 ntBASIC23.27■■□□□ 1.32
TSPAN3O60637 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TSPAN3O60637 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TSPAN3O60637 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TSPAN3O60637 AC006455.2-201ENST00000429931 906 ntBASIC23.27■■□□□ 1.32
TSPAN3O60637 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.27■■□□□ 1.32
TSPAN3O60637 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.27■■□□□ 1.32
TSPAN3O60637 AC135279.3-201ENST00000610945 1311 ntBASIC23.27■■□□□ 1.32
TSPAN3O60637 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.26■■□□□ 1.31
TSPAN3O60637 ABCB10P4-201ENST00000566803 2184 ntBASIC23.26■■□□□ 1.31
TSPAN3O60637 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TSPAN3O60637 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.26■■□□□ 1.31
TSPAN3O60637 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TSPAN3O60637 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
TSPAN3O60637 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TSPAN3O60637 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TSPAN3O60637 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.26■■□□□ 1.31
TSPAN3O60637 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TSPAN3O60637 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
TSPAN3O60637 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.25■■□□□ 1.31
TSPAN3O60637 SERBP1P1-201ENST00000396021 1160 ntBASIC23.25■■□□□ 1.31
TSPAN3O60637 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.25■■□□□ 1.31
TSPAN3O60637 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.25■■□□□ 1.31
TSPAN3O60637 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.25■■□□□ 1.31
TSPAN3O60637 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TSPAN3O60637 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
TSPAN3O60637 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
TSPAN3O60637 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TSPAN3O60637 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
TSPAN3O60637 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.24■■□□□ 1.31
TSPAN3O60637 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TSPAN3O60637 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TSPAN3O60637 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TSPAN3O60637 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.24■■□□□ 1.31
TSPAN3O60637 DUX4L19-201ENST00000557448 1267 ntBASIC23.24■■□□□ 1.31
TSPAN3O60637 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TSPAN3O60637 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.24■■□□□ 1.31
TSPAN3O60637 AC092171.4-201ENST00000609130 632 ntBASIC23.24■■□□□ 1.31
TSPAN3O60637 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TSPAN3O60637 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TSPAN3O60637 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TSPAN3O60637 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TSPAN3O60637 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.23■■□□□ 1.31
TSPAN3O60637 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.23■■□□□ 1.31
TSPAN3O60637 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.23■■□□□ 1.31
TSPAN3O60637 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.23■■□□□ 1.31
TSPAN3O60637 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.23■■□□□ 1.31
TSPAN3O60637 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
TSPAN3O60637 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
TSPAN3O60637 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TSPAN3O60637 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.22■■□□□ 1.31
TSPAN3O60637 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TSPAN3O60637 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.22■■□□□ 1.31
TSPAN3O60637 AC009086.3-201ENST00000623486 1008 ntBASIC23.22■■□□□ 1.31
TSPAN3O60637 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TSPAN3O60637 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TSPAN3O60637 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TSPAN3O60637 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TSPAN3O60637 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.22■■□□□ 1.31
TSPAN3O60637 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TSPAN3O60637 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TSPAN3O60637 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
TSPAN3O60637 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.21■■□□□ 1.31
TSPAN3O60637 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.21■■□□□ 1.31
TSPAN3O60637 AC241377.3-202ENST00000626088 1088 ntBASIC23.21■■□□□ 1.31
TSPAN3O60637 AC241585.3-202ENST00000628937 1088 ntBASIC23.21■■□□□ 1.31
TSPAN3O60637 AC245100.8-202ENST00000629247 1058 ntBASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms