Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSNA1O43805 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.23■□□□□ 0.67
SSNA1O43805 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSNA1O43805 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.23■□□□□ 0.67
SSNA1O43805 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSNA1O43805 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSNA1O43805 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SSNA1O43805 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSNA1O43805 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SSNA1O43805 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSNA1O43805 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSNA1O43805 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSNA1O43805 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSNA1O43805 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSNA1O43805 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSNA1O43805 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSNA1O43805 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSNA1O43805 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.21■□□□□ 0.67
SSNA1O43805 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSNA1O43805 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSNA1O43805 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSNA1O43805 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSNA1O43805 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSNA1O43805 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSNA1O43805 AL359258.2-201ENST00000564063 1566 ntBASIC19.21■□□□□ 0.67
SSNA1O43805 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
SSNA1O43805 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSNA1O43805 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSNA1O43805 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSNA1O43805 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SSNA1O43805 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SSNA1O43805 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSNA1O43805 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSNA1O43805 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SSNA1O43805 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SSNA1O43805 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SSNA1O43805 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SSNA1O43805 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
SSNA1O43805 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SSNA1O43805 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SSNA1O43805 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSNA1O43805 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSNA1O43805 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSNA1O43805 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SSNA1O43805 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSNA1O43805 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SSNA1O43805 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSNA1O43805 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSNA1O43805 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
SSNA1O43805 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.19■□□□□ 0.66
SSNA1O43805 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSNA1O43805 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.19■□□□□ 0.66
SSNA1O43805 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
SSNA1O43805 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSNA1O43805 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSNA1O43805 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSNA1O43805 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.19■□□□□ 0.66
SSNA1O43805 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.19■□□□□ 0.66
SSNA1O43805 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSNA1O43805 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSNA1O43805 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.19■□□□□ 0.66
SSNA1O43805 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SSNA1O43805 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.18■□□□□ 0.66
SSNA1O43805 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSNA1O43805 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSNA1O43805 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSNA1O43805 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.18■□□□□ 0.66
SSNA1O43805 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
SSNA1O43805 AC136428.2-201ENST00000563187 214 ntBASIC19.18■□□□□ 0.66
SSNA1O43805 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSNA1O43805 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.18■□□□□ 0.66
SSNA1O43805 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.18■□□□□ 0.66
SSNA1O43805 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSNA1O43805 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSNA1O43805 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSNA1O43805 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.18■□□□□ 0.66
SSNA1O43805 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
SSNA1O43805 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.17■□□□□ 0.66
SSNA1O43805 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.17■□□□□ 0.66
SSNA1O43805 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSNA1O43805 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSNA1O43805 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSNA1O43805 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SSNA1O43805 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSNA1O43805 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SSNA1O43805 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SSNA1O43805 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSNA1O43805 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SSNA1O43805 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSNA1O43805 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSNA1O43805 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSNA1O43805 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSNA1O43805 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSNA1O43805 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSNA1O43805 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.16■□□□□ 0.66
SSNA1O43805 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SSNA1O43805 AC097358.2-201ENST00000607541 1159 ntBASIC19.16■□□□□ 0.66
SSNA1O43805 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SSNA1O43805 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSNA1O43805 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms