Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.34■■□□□ 1.01
RRP8O43159 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.34■■□□□ 1.01
RRP8O43159 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.34■■□□□ 1.01
RRP8O43159 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.34■■□□□ 1.01
RRP8O43159 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RRP8O43159 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.33■■□□□ 1.01
RRP8O43159 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
RRP8O43159 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.33■■□□□ 1.01
RRP8O43159 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RRP8O43159 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.33■■□□□ 1.01
RRP8O43159 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RRP8O43159 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
RRP8O43159 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RRP8O43159 AL022069.1-201ENST00000568025 1636 ntBASIC21.33■■□□□ 1
RRP8O43159 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RRP8O43159 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
RRP8O43159 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RRP8O43159 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RRP8O43159 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RRP8O43159 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
RRP8O43159 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.32■■□□□ 1
RRP8O43159 AC080038.1-201ENST00000611274 1154 ntBASIC21.32■■□□□ 1
RRP8O43159 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RRP8O43159 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RRP8O43159 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RRP8O43159 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RRP8O43159 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.31■■□□□ 1
RRP8O43159 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.31■■□□□ 1
RRP8O43159 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.31■■□□□ 1
RRP8O43159 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.31■■□□□ 1
RRP8O43159 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.31■■□□□ 1
RRP8O43159 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RRP8O43159 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RRP8O43159 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.3■■□□□ 1
RRP8O43159 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RRP8O43159 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.3■■□□□ 1
RRP8O43159 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RRP8O43159 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.3■■□□□ 1
RRP8O43159 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.3■■□□□ 1
RRP8O43159 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.3■■□□□ 1
RRP8O43159 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RRP8O43159 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.29■■□□□ 1
RRP8O43159 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.29■■□□□ 1
RRP8O43159 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
RRP8O43159 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
RRP8O43159 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RRP8O43159 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.29■■□□□ 1
RRP8O43159 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.29■■□□□ 1
RRP8O43159 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RRP8O43159 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.29■■□□□ 1
RRP8O43159 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
RRP8O43159 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.29■■□□□ 1
RRP8O43159 TERF1P2-201ENST00000583350 1212 ntBASIC21.29■■□□□ 1
RRP8O43159 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.29■■□□□ 1
RRP8O43159 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.29■■□□□ 1
RRP8O43159 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.29■■□□□ 1
RRP8O43159 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RRP8O43159 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.29■■□□□ 1
RRP8O43159 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RRP8O43159 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RRP8O43159 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.28■■□□□ 1
RRP8O43159 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.28■■□□□ 1
RRP8O43159 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.28■■□□□ 1
RRP8O43159 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.28■■□□□ 1
RRP8O43159 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.28■■□□□ 1
RRP8O43159 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RRP8O43159 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.28■■□□□ 1
RRP8O43159 ESRRAP2-201ENST00000418437 1549 ntBASIC21.28■■□□□ 1
RRP8O43159 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RRP8O43159 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RRP8O43159 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.27■■□□□ 1
RRP8O43159 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RRP8O43159 AC016769.1-201ENST00000409132 1010 ntBASIC21.27■■□□□ 1
RRP8O43159 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.27■■□□□ 1
RRP8O43159 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RRP8O43159 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RRP8O43159 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RRP8O43159 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RRP8O43159 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RRP8O43159 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RRP8O43159 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RRP8O43159 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RRP8O43159 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RRP8O43159 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RRP8O43159 ABHD17AP1-201ENST00000358206 933 ntBASIC21.26■□□□□ 0.99
RRP8O43159 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.26■□□□□ 0.99
RRP8O43159 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.26■□□□□ 0.99
RRP8O43159 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RRP8O43159 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RRP8O43159 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RRP8O43159 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.26■□□□□ 0.99
RRP8O43159 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RRP8O43159 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.26■□□□□ 0.99
RRP8O43159 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.25■□□□□ 0.99
RRP8O43159 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.25■□□□□ 0.99
RRP8O43159 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RRP8O43159 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.25■□□□□ 0.99
RRP8O43159 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.25■□□□□ 0.99
RRP8O43159 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.25■□□□□ 0.99
RRP8O43159 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms