Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.184e-7■■■□□ 15.8
NKRFO15226 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.164e-7■■■□□ 15.8
NKRFO15226 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.254e-7■■■□□ 15.8
NKRFO15226 ZMIZ1-203ENST00000472035 457 ntTSL 216.34■□□□□ 0.211e-6■■■□□ 15.8
NKRFO15226 RABL6-209ENST00000466096 3949 ntTSL 1 (best)15.5■□□□□ 0.076e-7■■■□□ 15.8
NKRFO15226 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.232e-10■■■□□ 15.8
NKRFO15226 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.142e-6■■■□□ 15.8
NKRFO15226 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.062e-6■■■□□ 15.8
NKRFO15226 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.062e-6■■■□□ 15.8
NKRFO15226 MROH1-211ENST00000544576 3673 ntTSL 1 (best) BASIC13.16□□□□□ -0.32e-6■■■□□ 15.8
NKRFO15226 C16orf72-202ENST00000574285 10359 ntTSL 25.25□□□□□ -1.572e-10■■■□□ 15.8
NKRFO15226 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.39■□□□□ 0.851e-6■■■□□ 15.8
NKRFO15226 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.721e-6■■■□□ 15.8
NKRFO15226 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.373e-6■■■□□ 15.7
NKRFO15226 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.59■□□□□ 0.256e-16■■■□□ 15.7
NKRFO15226 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.55■□□□□ 0.246e-16■■■□□ 15.7
NKRFO15226 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.26e-16■■■□□ 15.7
NKRFO15226 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.29■□□□□ 0.26e-16■■■□□ 15.7
NKRFO15226 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.26e-16■■■□□ 15.7
NKRFO15226 MLXIPL-202ENST00000345114 3079 ntTSL 1 (best)15.45■□□□□ 0.066e-16■■■□□ 15.7
NKRFO15226 KPNA4-202ENST00000469804 790 ntTSL 229.03■■■□□ 2.243e-6■■■□□ 15.7
NKRFO15226 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.373e-6■■■□□ 15.7
NKRFO15226 ARHGEF10L-201ENST00000167825 3018 ntTSL 214.82□□□□□ -0.042e-6■■■□□ 15.7
NKRFO15226 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.152e-6■■■□□ 15.7
NKRFO15226 ARHGEF10L-206ENST00000469726 4585 ntTSL 213.87□□□□□ -0.192e-6■■■□□ 15.7
NKRFO15226 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC13.03□□□□□ -0.322e-6■■■□□ 15.7
NKRFO15226 ARHGEF10L-204ENST00000375415 4035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.482e-6■■■□□ 15.7
NKRFO15226 EHMT1-224ENST00000630754 709 ntTSL 322.43■■□□□ 1.183e-9■■■□□ 15.7
NKRFO15226 EHMT1-243ENST00000637593 100 ntTSL 520.46■□□□□ 0.873e-9■■■□□ 15.7
NKRFO15226 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.33■□□□□ 0.853e-9■■■□□ 15.7
NKRFO15226 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.563e-9■■■□□ 15.7
NKRFO15226 EHMT1-220ENST00000626216 558 ntTSL 316.18■□□□□ 0.183e-9■■■□□ 15.7
NKRFO15226 EHMT1-201ENST00000371394 2679 ntTSL 215.69■□□□□ 0.13e-9■■■□□ 15.7
NKRFO15226 EHMT1-221ENST00000629335 3600 ntTSL 5 BASIC13.12□□□□□ -0.313e-9■■■□□ 15.7
NKRFO15226 AL590627.2-202ENST00000636318 138 ntTSL 513.03□□□□□ -0.323e-9■■■□□ 15.7
NKRFO15226 CTBP1-212ENST00000513420 704 ntTSL 317.19■□□□□ 0.344e-7■■■□□ 15.7
NKRFO15226 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.11■■■□□ 2.094e-7■■■□□ 15.7
NKRFO15226 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.74e-7■■■□□ 15.7
NKRFO15226 CTBP1-208ENST00000506180 843 ntTSL 521.39■■□□□ 1.014e-7■■■□□ 15.7
NKRFO15226 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.263e-7■■■□□ 15.7
NKRFO15226 PXDC1-203ENST00000477592 1697 ntTSL 519.49■□□□□ 0.713e-7■■■□□ 15.7
NKRFO15226 PQLC1-209ENST00000589000 558 ntTSL 413.44□□□□□ -0.262e-7■■■□□ 15.7
NKRFO15226 ACSF2-221ENST00000512119 598 ntTSL 316.55■□□□□ 0.242e-8■■■□□ 15.7
NKRFO15226 ACSF2-205ENST00000503387 559 ntTSL 415.43■□□□□ 0.062e-8■■■□□ 15.7
NKRFO15226 SEPT9-215ENST00000586521 601 ntTSL 419.8■□□□□ 0.765e-7■■■□□ 15.7
NKRFO15226 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.553e-6■■■□□ 15.7
NKRFO15226 ONECUT1-203ENST00000561401 583 ntTSL 38.73□□□□□ -1.013e-6■■■□□ 15.7
NKRFO15226 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.543e-6■■■□□ 15.7
NKRFO15226 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.571e-6■■■□□ 15.7
NKRFO15226 TMEM138-205ENST00000507563 1134 ntTSL 217.91■□□□□ 0.461e-6■■■□□ 15.7
NKRFO15226 TMEM138-208ENST00000540194 587 ntTSL 317■□□□□ 0.311e-6■■■□□ 15.7
NKRFO15226 TMEM138-203ENST00000423772 2068 ntTSL 312.79□□□□□ -0.361e-6■■■□□ 15.7
NKRFO15226 TMEM138-204ENST00000451389 549 ntTSL 312.54□□□□□ -0.41e-6■■■□□ 15.7
NKRFO15226 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC10.53□□□□□ -0.721e-6■■■□□ 15.7
NKRFO15226 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC8.07□□□□□ -1.121e-6■■■□□ 15.7
NKRFO15226 TMEM138-212ENST00000545420 555 ntTSL 37.03□□□□□ -1.281e-6■■■□□ 15.7
NKRFO15226 CAPN15-208ENST00000637507 1482 ntTSL 525.32■■□□□ 1.641e-6■■■□□ 15.7
NKRFO15226 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.53■■□□□ 1.683e-21■■■□□ 15.7
NKRFO15226 SLC22A31-204ENST00000568161 651 ntTSL 316.95■□□□□ 0.33e-21■■■□□ 15.7
NKRFO15226 CTBP1-214ENST00000514495 564 ntTSL 232.17■■■□□ 2.744e-7■■■□□ 15.6
NKRFO15226 CTBP1-217ENST00000515399 985 ntTSL 322.6■■□□□ 1.214e-7■■■□□ 15.6
NKRFO15226 SHH-204ENST00000441114 888 ntTSL 1 (best)21.39■■□□□ 1.011e-6■■■□□ 15.6
NKRFO15226 SHH-203ENST00000435425 807 ntTSL 1 (best)21.39■■□□□ 1.011e-6■■■□□ 15.6
NKRFO15226 SHH-202ENST00000430104 677 ntTSL 1 (best)21.39■■□□□ 1.011e-6■■■□□ 15.6
NKRFO15226 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.111e-6■■■□□ 15.6
NKRFO15226 PC-202ENST00000393958 4005 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.613e-6■■■□□ 15.6
NKRFO15226 PC-201ENST00000393955 4004 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.673e-6■■■□□ 15.6
NKRFO15226 PC-203ENST00000393960 4192 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.683e-6■■■□□ 15.6
NKRFO15226 MYRF-206ENST00000537766 1392 ntTSL 328.43■■■□□ 2.149e-7■■■□□ 15.6
NKRFO15226 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.349e-7■■■□□ 15.6
NKRFO15226 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.29■■□□□ 1.644e-8■■■□□ 15.6
NKRFO15226 CIC-208ENST00000575839 335 ntTSL 518.47■□□□□ 0.554e-8■■■□□ 15.6
NKRFO15226 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.79□□□□□ -0.364e-8■■■□□ 15.6
NKRFO15226 SEPT9-243ENST00000592407 509 ntTSL 221.7■■□□□ 1.065e-6■■■□□ 15.6
NKRFO15226 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.79■□□□□ 0.763e-6■■■□□ 15.6
NKRFO15226 PDE6D-205ENST00000486044 1005 ntTSL 219.08■□□□□ 0.643e-6■■■□□ 15.6
NKRFO15226 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.433e-6■■■□□ 15.6
NKRFO15226 PDE6D-203ENST00000428104 627 ntTSL 317.1■□□□□ 0.333e-6■■■□□ 15.6
NKRFO15226 PDE6D-204ENST00000477748 996 ntTSL 1 (best)16.3■□□□□ 0.23e-6■■■□□ 15.6
NKRFO15226 CTBP1-213ENST00000514210 856 ntTSL 217.07■□□□□ 0.324e-7■■■□□ 15.6
NKRFO15226 SPPL2B-208ENST00000612623 495 ntTSL 519.48■□□□□ 0.715e-6■■■□□ 15.6
NKRFO15226 PEG10-201ENST00000465184 788 ntTSL 35.77□□□□□ -1.498e-8■■■□□ 15.6
NKRFO15226 AC215219.1-201ENST00000400706 1817 ntBASIC16.24■□□□□ 0.192e-7■■■□□ 15.6
NKRFO15226 BCAR1-210ENST00000561970 594 ntTSL 433.95■■■■□ 3.034e-7■■■□□ 15.6
NKRFO15226 RBBP6-211ENST00000568316 556 ntTSL 528.21■■■□□ 2.115e-16■■■□□ 15.6
NKRFO15226 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.895e-7■■■□□ 15.6
NKRFO15226 BSG-207ENST00000573216 545 ntTSL 420.09■□□□□ 0.815e-7■■■□□ 15.6
NKRFO15226 BSG-210ENST00000576925 611 ntTSL 220.09■□□□□ 0.815e-7■■■□□ 15.6
NKRFO15226 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.23■□□□□ 0.675e-7■■■□□ 15.6
NKRFO15226 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19■□□□□ 0.635e-7■■■□□ 15.6
NKRFO15226 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.78■□□□□ 0.65e-7■■■□□ 15.6
NKRFO15226 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.78■□□□□ 0.65e-7■■■□□ 15.6
NKRFO15226 BSG-213ENST00000613627 689 ntTSL 317.97■□□□□ 0.475e-7■■■□□ 15.6
NKRFO15226 BSG-206ENST00000572899 582 ntTSL 217.83■□□□□ 0.445e-7■■■□□ 15.6
NKRFO15226 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.82■□□□□ 0.445e-7■■■□□ 15.6
NKRFO15226 SH3BP2-215ENST00000510074 649 ntTSL 518.74■□□□□ 0.598e-7■■■□□ 15.6
NKRFO15226 SH3BP2-219ENST00000511237 517 ntTSL 518.74■□□□□ 0.598e-7■■■□□ 15.6
NKRFO15226 PLEC-214ENST00000528131 564 ntTSL 321.79■■□□□ 1.082e-6■■■□□ 15.6
NKRFO15226 PLEC-213ENST00000528025 2115 ntTSL 521.5■■□□□ 1.032e-6■■■□□ 15.6
NKRFO15226 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.512e-6■■■□□ 15.6
Retrieved 100 of 9,198 protein–RNA pairs in 55.5 ms