Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN4O14493 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN4O14493 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN4O14493 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.25■□□□□ 0.99
CLDN4O14493 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN4O14493 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.25■□□□□ 0.99
CLDN4O14493 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN4O14493 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN4O14493 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN4O14493 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN4O14493 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN4O14493 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN4O14493 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN4O14493 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN4O14493 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN4O14493 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN4O14493 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
CLDN4O14493 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN4O14493 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN4O14493 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN4O14493 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN4O14493 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN4O14493 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.23■□□□□ 0.99
CLDN4O14493 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN4O14493 AC009102.2-201ENST00000606772 1639 ntBASIC21.23■□□□□ 0.99
CLDN4O14493 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN4O14493 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CLDN4O14493 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.23■□□□□ 0.99
CLDN4O14493 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN4O14493 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN4O14493 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN4O14493 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN4O14493 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN4O14493 AC008406.3-201ENST00000620001 1374 ntBASIC21.23■□□□□ 0.99
CLDN4O14493 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN4O14493 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN4O14493 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN4O14493 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN4O14493 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CLDN4O14493 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN4O14493 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN4O14493 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.22■□□□□ 0.99
CLDN4O14493 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN4O14493 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN4O14493 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
CLDN4O14493 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.22■□□□□ 0.99
CLDN4O14493 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CLDN4O14493 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN4O14493 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN4O14493 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN4O14493 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CLDN4O14493 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN4O14493 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.21■□□□□ 0.99
CLDN4O14493 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN4O14493 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN4O14493 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.21■□□□□ 0.99
CLDN4O14493 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN4O14493 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CLDN4O14493 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN4O14493 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.2■□□□□ 0.98
CLDN4O14493 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN4O14493 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN4O14493 SRD5A1P1-201ENST00000442297 786 ntBASIC21.2■□□□□ 0.98
CLDN4O14493 AC131281.2-201ENST00000520478 145 ntBASIC21.2■□□□□ 0.98
CLDN4O14493 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN4O14493 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.2■□□□□ 0.98
CLDN4O14493 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
CLDN4O14493 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN4O14493 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN4O14493 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN4O14493 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN4O14493 AL512631.2-201ENST00000604634 923 ntBASIC21.19■□□□□ 0.98
CLDN4O14493 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN4O14493 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CLDN4O14493 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN4O14493 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN4O14493 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN4O14493 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CLDN4O14493 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.18■□□□□ 0.98
CLDN4O14493 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CLDN4O14493 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN4O14493 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN4O14493 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.18■□□□□ 0.98
CLDN4O14493 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN4O14493 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN4O14493 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.18■□□□□ 0.98
CLDN4O14493 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN4O14493 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN4O14493 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN4O14493 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN4O14493 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN4O14493 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN4O14493 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CLDN4O14493 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN4O14493 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN4O14493 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN4O14493 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN4O14493 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CLDN4O14493 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.17■□□□□ 0.98
CLDN4O14493 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms