Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TAF4O00268 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
TAF4O00268 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TAF4O00268 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TAF4O00268 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.95■■□□□ 1.1
TAF4O00268 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
TAF4O00268 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TAF4O00268 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TAF4O00268 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TAF4O00268 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TAF4O00268 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TAF4O00268 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.95■■□□□ 1.1
TAF4O00268 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TAF4O00268 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TAF4O00268 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.95■■□□□ 1.1
TAF4O00268 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.95■■□□□ 1.1
TAF4O00268 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TAF4O00268 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TAF4O00268 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TAF4O00268 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TAF4O00268 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.94■■□□□ 1.1
TAF4O00268 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.94■■□□□ 1.1
TAF4O00268 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TAF4O00268 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TAF4O00268 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TAF4O00268 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TAF4O00268 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.94■■□□□ 1.1
TAF4O00268 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.94■■□□□ 1.1
TAF4O00268 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.94■■□□□ 1.1
TAF4O00268 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
TAF4O00268 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
TAF4O00268 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
TAF4O00268 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TAF4O00268 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TAF4O00268 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.93■■□□□ 1.1
TAF4O00268 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TAF4O00268 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.93■■□□□ 1.1
TAF4O00268 ABHD17AP1-201ENST00000358206 933 ntBASIC21.93■■□□□ 1.1
TAF4O00268 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
TAF4O00268 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TAF4O00268 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
TAF4O00268 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TAF4O00268 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.93■■□□□ 1.1
TAF4O00268 AC011298.3-201ENST00000615796 283 ntBASIC21.93■■□□□ 1.1
TAF4O00268 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.93■■□□□ 1.1
TAF4O00268 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
TAF4O00268 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TAF4O00268 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TAF4O00268 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TAF4O00268 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TAF4O00268 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TAF4O00268 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.92■■□□□ 1.1
TAF4O00268 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.92■■□□□ 1.1
TAF4O00268 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.92■■□□□ 1.1
TAF4O00268 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
TAF4O00268 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TAF4O00268 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.91■■□□□ 1.1
TAF4O00268 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TAF4O00268 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TAF4O00268 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.91■■□□□ 1.1
TAF4O00268 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
TAF4O00268 YBX1P1-201ENST00000445822 960 ntBASIC21.91■■□□□ 1.1
TAF4O00268 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.91■■□□□ 1.1
TAF4O00268 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TAF4O00268 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TAF4O00268 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TAF4O00268 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.91■■□□□ 1.1
TAF4O00268 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TAF4O00268 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TAF4O00268 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.9■■□□□ 1.1
TAF4O00268 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TAF4O00268 AC099791.2-201ENST00000605725 427 ntBASIC21.9■■□□□ 1.1
TAF4O00268 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.9■■□□□ 1.1
TAF4O00268 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
TAF4O00268 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TAF4O00268 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TAF4O00268 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
TAF4O00268 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.89■■□□□ 1.1
TAF4O00268 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TAF4O00268 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.89■■□□□ 1.1
TAF4O00268 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TAF4O00268 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
TAF4O00268 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.89■■□□□ 1.09
TAF4O00268 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
TAF4O00268 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.88■■□□□ 1.09
TAF4O00268 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.88■■□□□ 1.09
TAF4O00268 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.88■■□□□ 1.09
TAF4O00268 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TAF4O00268 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TAF4O00268 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.88■■□□□ 1.09
TAF4O00268 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
TAF4O00268 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.88■■□□□ 1.09
TAF4O00268 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.88■■□□□ 1.09
TAF4O00268 AL138724.1-201ENST00000606771 1088 ntBASIC21.88■■□□□ 1.09
TAF4O00268 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
TAF4O00268 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TAF4O00268 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TAF4O00268 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TAF4O00268 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
TAF4O00268 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms