Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.53■□□□□ 0.88
NPIPA2E9PIF3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPIPA2E9PIF3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPIPA2E9PIF3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPIPA2E9PIF3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPIPA2E9PIF3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.53■□□□□ 0.88
NPIPA2E9PIF3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPIPA2E9PIF3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
NPIPA2E9PIF3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NPIPA2E9PIF3 SYT6-210ENST00000641643 1587 ntBASIC20.52■□□□□ 0.88
NPIPA2E9PIF3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPIPA2E9PIF3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NPIPA2E9PIF3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPIPA2E9PIF3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPIPA2E9PIF3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.51■□□□□ 0.87
NPIPA2E9PIF3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPIPA2E9PIF3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.51■□□□□ 0.87
NPIPA2E9PIF3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
NPIPA2E9PIF3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.51■□□□□ 0.87
NPIPA2E9PIF3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.51■□□□□ 0.87
NPIPA2E9PIF3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NPIPA2E9PIF3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.51■□□□□ 0.87
NPIPA2E9PIF3 AC092171.4-201ENST00000609130 632 ntBASIC20.51■□□□□ 0.87
NPIPA2E9PIF3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
NPIPA2E9PIF3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.51■□□□□ 0.87
NPIPA2E9PIF3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPIPA2E9PIF3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NPIPA2E9PIF3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.51■□□□□ 0.87
NPIPA2E9PIF3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NPIPA2E9PIF3 AC009102.2-201ENST00000606772 1639 ntBASIC20.5■□□□□ 0.87
NPIPA2E9PIF3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPIPA2E9PIF3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NPIPA2E9PIF3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NPIPA2E9PIF3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NPIPA2E9PIF3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.5■□□□□ 0.87
NPIPA2E9PIF3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NPIPA2E9PIF3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.5■□□□□ 0.87
NPIPA2E9PIF3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NPIPA2E9PIF3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPIPA2E9PIF3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPIPA2E9PIF3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPIPA2E9PIF3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPIPA2E9PIF3 EDA-201ENST00000338901 1233 ntBASIC20.49■□□□□ 0.87
NPIPA2E9PIF3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NPIPA2E9PIF3 AC099791.2-201ENST00000605725 427 ntBASIC20.49■□□□□ 0.87
NPIPA2E9PIF3 AL031432.3-201ENST00000607698 485 ntBASIC20.49■□□□□ 0.87
NPIPA2E9PIF3 AL355001.2-201ENST00000620617 1191 ntBASIC20.49■□□□□ 0.87
NPIPA2E9PIF3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NPIPA2E9PIF3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPIPA2E9PIF3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPIPA2E9PIF3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPIPA2E9PIF3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.48■□□□□ 0.87
NPIPA2E9PIF3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.48■□□□□ 0.87
NPIPA2E9PIF3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPIPA2E9PIF3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPIPA2E9PIF3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.48■□□□□ 0.87
NPIPA2E9PIF3 SUDS3P1-201ENST00000505831 966 ntBASIC20.48■□□□□ 0.87
NPIPA2E9PIF3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.48■□□□□ 0.87
NPIPA2E9PIF3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
NPIPA2E9PIF3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
NPIPA2E9PIF3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPIPA2E9PIF3 AC093323.1-202ENST00000635031 2045 ntBASIC20.48■□□□□ 0.87
NPIPA2E9PIF3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPIPA2E9PIF3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPIPA2E9PIF3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.47■□□□□ 0.87
NPIPA2E9PIF3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
NPIPA2E9PIF3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPIPA2E9PIF3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NPIPA2E9PIF3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPIPA2E9PIF3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.47■□□□□ 0.87
NPIPA2E9PIF3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NPIPA2E9PIF3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPIPA2E9PIF3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPIPA2E9PIF3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NPIPA2E9PIF3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NPIPA2E9PIF3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.46■□□□□ 0.87
NPIPA2E9PIF3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NPIPA2E9PIF3 ZNRF2P3-201ENST00000424200 374 ntBASIC20.46■□□□□ 0.87
NPIPA2E9PIF3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPIPA2E9PIF3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
NPIPA2E9PIF3 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.46■□□□□ 0.87
NPIPA2E9PIF3 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.46■□□□□ 0.87
NPIPA2E9PIF3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPIPA2E9PIF3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.46■□□□□ 0.87
NPIPA2E9PIF3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NPIPA2E9PIF3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPIPA2E9PIF3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.45■□□□□ 0.86
NPIPA2E9PIF3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.45■□□□□ 0.86
NPIPA2E9PIF3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
NPIPA2E9PIF3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.44■□□□□ 0.86
NPIPA2E9PIF3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NPIPA2E9PIF3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NPIPA2E9PIF3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NPIPA2E9PIF3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPIPA2E9PIF3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPIPA2E9PIF3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPIPA2E9PIF3 SERBP1P1-201ENST00000396021 1160 ntBASIC20.44■□□□□ 0.86
NPIPA2E9PIF3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.44■□□□□ 0.86
NPIPA2E9PIF3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPIPA2E9PIF3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms