Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
CCDC163A0A0D9SF12 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.64■■□□□ 1.21
CCDC163A0A0D9SF12 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC163A0A0D9SF12 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC163A0A0D9SF12 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC163A0A0D9SF12 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
CCDC163A0A0D9SF12 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC163A0A0D9SF12 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CCDC163A0A0D9SF12 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CCDC163A0A0D9SF12 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CCDC163A0A0D9SF12 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.63■■□□□ 1.21
CCDC163A0A0D9SF12 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.63■■□□□ 1.21
CCDC163A0A0D9SF12 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.63■■□□□ 1.21
CCDC163A0A0D9SF12 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC163A0A0D9SF12 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC163A0A0D9SF12 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
CCDC163A0A0D9SF12 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.62■■□□□ 1.21
CCDC163A0A0D9SF12 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC163A0A0D9SF12 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CCDC163A0A0D9SF12 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC163A0A0D9SF12 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC163A0A0D9SF12 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.62■■□□□ 1.21
CCDC163A0A0D9SF12 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC163A0A0D9SF12 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC163A0A0D9SF12 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC163A0A0D9SF12 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC163A0A0D9SF12 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.61■■□□□ 1.21
CCDC163A0A0D9SF12 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
CCDC163A0A0D9SF12 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.61■■□□□ 1.21
CCDC163A0A0D9SF12 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.61■■□□□ 1.21
CCDC163A0A0D9SF12 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC163A0A0D9SF12 TERF1P2-201ENST00000583350 1212 ntBASIC22.61■■□□□ 1.21
CCDC163A0A0D9SF12 NTF6G-201ENST00000591094 616 ntBASIC22.61■■□□□ 1.21
CCDC163A0A0D9SF12 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC163A0A0D9SF12 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC163A0A0D9SF12 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC163A0A0D9SF12 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC163A0A0D9SF12 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC163A0A0D9SF12 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC163A0A0D9SF12 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.6■■□□□ 1.21
CCDC163A0A0D9SF12 LINC02228-203ENST00000641970 1355 ntBASIC22.6■■□□□ 1.21
CCDC163A0A0D9SF12 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.6■■□□□ 1.21
CCDC163A0A0D9SF12 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.6■■□□□ 1.21
CCDC163A0A0D9SF12 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.6■■□□□ 1.21
CCDC163A0A0D9SF12 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC163A0A0D9SF12 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC163A0A0D9SF12 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC163A0A0D9SF12 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC163A0A0D9SF12 KRT18P14-201ENST00000534205 1250 ntBASIC22.59■■□□□ 1.21
CCDC163A0A0D9SF12 MIR6084-201ENST00000622012 110 ntBASIC22.59■■□□□ 1.21
CCDC163A0A0D9SF12 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.59■■□□□ 1.21
CCDC163A0A0D9SF12 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.59■■□□□ 1.21
CCDC163A0A0D9SF12 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC163A0A0D9SF12 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC163A0A0D9SF12 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
CCDC163A0A0D9SF12 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC163A0A0D9SF12 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC163A0A0D9SF12 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC163A0A0D9SF12 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
CCDC163A0A0D9SF12 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.58■■□□□ 1.21
CCDC163A0A0D9SF12 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.58■■□□□ 1.21
CCDC163A0A0D9SF12 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.58■■□□□ 1.21
CCDC163A0A0D9SF12 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
CCDC163A0A0D9SF12 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC163A0A0D9SF12 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.58■■□□□ 1.2
CCDC163A0A0D9SF12 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC163A0A0D9SF12 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC163A0A0D9SF12 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
CCDC163A0A0D9SF12 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CCDC163A0A0D9SF12 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC163A0A0D9SF12 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
CCDC163A0A0D9SF12 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC163A0A0D9SF12 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC163A0A0D9SF12 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
CCDC163A0A0D9SF12 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.56■■□□□ 1.2
CCDC163A0A0D9SF12 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.56■■□□□ 1.2
CCDC163A0A0D9SF12 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.56■■□□□ 1.2
CCDC163A0A0D9SF12 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC163A0A0D9SF12 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.56■■□□□ 1.2
CCDC163A0A0D9SF12 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC163A0A0D9SF12 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC163A0A0D9SF12 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC163A0A0D9SF12 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC163A0A0D9SF12 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC163A0A0D9SF12 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC163A0A0D9SF12 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC163A0A0D9SF12 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC163A0A0D9SF12 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC163A0A0D9SF12 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC163A0A0D9SF12 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC163A0A0D9SF12 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
CCDC163A0A0D9SF12 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC163A0A0D9SF12 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC163A0A0D9SF12 AC133637.1-201ENST00000624115 1537 ntBASIC22.54■■□□□ 1.2
CCDC163A0A0D9SF12 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.54■■□□□ 1.2
CCDC163A0A0D9SF12 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC163A0A0D9SF12 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CCDC163A0A0D9SF12 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CCDC163A0A0D9SF12 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC163A0A0D9SF12 AL499627.2-201ENST00000606283 725 ntBASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms