Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 ABCB10P4-201ENST00000566803 2184 ntBASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 LINC01124-201ENST00000409786 2117 ntBASIC16.18■□□□□ 0.18
TRAV26-1A0A087WT03 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV26-1A0A087WT03 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV26-1A0A087WT03 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV26-1A0A087WT03 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRAV26-1A0A087WT03 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV26-1A0A087WT03 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV26-1A0A087WT03 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRAV26-1A0A087WT03 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV26-1A0A087WT03 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV26-1A0A087WT03 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAV26-1A0A087WT03 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV26-1A0A087WT03 AL161729.1-201ENST00000604104 1402 ntBASIC16.17■□□□□ 0.18
TRAV26-1A0A087WT03 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRAV26-1A0A087WT03 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV26-1A0A087WT03 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV26-1A0A087WT03 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV26-1A0A087WT03 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV26-1A0A087WT03 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV26-1A0A087WT03 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV26-1A0A087WT03 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV26-1A0A087WT03 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV26-1A0A087WT03 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV26-1A0A087WT03 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAV26-1A0A087WT03 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV26-1A0A087WT03 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV26-1A0A087WT03 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV26-1A0A087WT03 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV26-1A0A087WT03 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRAV26-1A0A087WT03 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV26-1A0A087WT03 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV26-1A0A087WT03 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV26-1A0A087WT03 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV26-1A0A087WT03 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV26-1A0A087WT03 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV26-1A0A087WT03 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV26-1A0A087WT03 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV26-1A0A087WT03 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV26-1A0A087WT03 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV26-1A0A087WT03 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV26-1A0A087WT03 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV26-1A0A087WT03 MTDHP2-201ENST00000601468 714 ntBASIC16.15■□□□□ 0.18
TRAV26-1A0A087WT03 AC068473.5-201ENST00000616428 2072 ntBASIC16.15■□□□□ 0.18
TRAV26-1A0A087WT03 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV26-1A0A087WT03 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV26-1A0A087WT03 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV26-1A0A087WT03 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV26-1A0A087WT03 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV26-1A0A087WT03 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV26-1A0A087WT03 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV26-1A0A087WT03 AC131274.2-201ENST00000580697 1507 ntBASIC16.14■□□□□ 0.18
TRAV26-1A0A087WT03 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV26-1A0A087WT03 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV26-1A0A087WT03 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV26-1A0A087WT03 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV26-1A0A087WT03 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
TRAV26-1A0A087WT03 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.14■□□□□ 0.17
TRAV26-1A0A087WT03 SNX5-217ENST00000606557 1087 ntBASIC16.14■□□□□ 0.17
TRAV26-1A0A087WT03 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV26-1A0A087WT03 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRAV26-1A0A087WT03 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV26-1A0A087WT03 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV26-1A0A087WT03 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRAV26-1A0A087WT03 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV26-1A0A087WT03 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRAV26-1A0A087WT03 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV26-1A0A087WT03 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV26-1A0A087WT03 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV26-1A0A087WT03 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV26-1A0A087WT03 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV26-1A0A087WT03 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV26-1A0A087WT03 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV26-1A0A087WT03 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV26-1A0A087WT03 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV26-1A0A087WT03 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
TRAV26-1A0A087WT03 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRAV26-1A0A087WT03 AC004448.1-201ENST00000458332 883 ntBASIC16.13■□□□□ 0.17
TRAV26-1A0A087WT03 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.13■□□□□ 0.17
TRAV26-1A0A087WT03 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV26-1A0A087WT03 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV26-1A0A087WT03 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRAV26-1A0A087WT03 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV26-1A0A087WT03 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
TRAV26-1A0A087WT03 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV26-1A0A087WT03 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV26-1A0A087WT03 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV26-1A0A087WT03 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV26-1A0A087WT03 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV26-1A0A087WT03 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV26-1A0A087WT03 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV26-1A0A087WT03 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV26-1A0A087WT03 KRT16P3-201ENST00000439127 1283 ntBASIC16.12■□□□□ 0.17
TRAV26-1A0A087WT03 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.12■□□□□ 0.17
TRAV26-1A0A087WT03 UNC93B8-201ENST00000511903 705 ntBASIC16.12■□□□□ 0.17
TRAV26-1A0A087WT03 AC010997.5-201ENST00000609182 354 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms