Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 CEP164P1-201ENST00000455142 418 ntBASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 AC242376.1-201ENST00000559033 726 ntBASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 AC006453.1-201ENST00000636037 1257 ntBASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 AC006480.2-201ENST00000609770 1337 ntBASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 TBC1D3J-201ENST00000620719 1426 ntBASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA1Q9UND3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPA1Q9UND3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
NPIPA1Q9UND3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
NPIPA1Q9UND3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPA1Q9UND3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.27□□□□□ -0.28
NPIPA1Q9UND3 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.27□□□□□ -0.28
NPIPA1Q9UND3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
NPIPA1Q9UND3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPA1Q9UND3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.27□□□□□ -0.28
NPIPA1Q9UND3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.27□□□□□ -0.28
NPIPA1Q9UND3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPA1Q9UND3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPA1Q9UND3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
NPIPA1Q9UND3 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 AL645933.1-201ENST00000440087 609 ntBASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 U62317.3-201ENST00000608319 855 ntBASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 AL157813.1-201ENST00000612996 587 ntBASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 AC133540.1-201ENST00000620845 1019 ntBASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA1Q9UND3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA1Q9UND3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms