Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RPL17P45-201ENST00000586289 509 ntBASIC13.69□□□□□ -0.22
CCDC88CQ9P219 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.69□□□□□ -0.22
CCDC88CQ9P219 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CCDC88CQ9P219 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
CCDC88CQ9P219 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC88CQ9P219 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC88CQ9P219 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC88CQ9P219 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC88CQ9P219 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CCDC88CQ9P219 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC88CQ9P219 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC88CQ9P219 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC88CQ9P219 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.69□□□□□ -0.22
CCDC88CQ9P219 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 AC092580.1-201ENST00000433998 658 ntBASIC13.68□□□□□ -0.22
CCDC88CQ9P219 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.68□□□□□ -0.22
CCDC88CQ9P219 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.68□□□□□ -0.22
CCDC88CQ9P219 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC88CQ9P219 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 TBC1D3J-201ENST00000620719 1426 ntBASIC13.67□□□□□ -0.22
CCDC88CQ9P219 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 DUTP3-201ENST00000450025 415 ntBASIC13.67□□□□□ -0.22
CCDC88CQ9P219 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 RN7SL163P-201ENST00000583100 276 ntBASIC13.67□□□□□ -0.22
CCDC88CQ9P219 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 MIR6074-201ENST00000612054 107 ntBASIC13.67□□□□□ -0.22
CCDC88CQ9P219 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 KRT8P28-201ENST00000433288 1390 ntBASIC13.67□□□□□ -0.22
CCDC88CQ9P219 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC88CQ9P219 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms