Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC21.46■■□□□ 1.03
CCER1Q8TC90 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC21.46■■□□□ 1.03
CCER1Q8TC90 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC21.46■■□□□ 1.03
CCER1Q8TC90 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC21.46■■□□□ 1.03
CCER1Q8TC90 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCER1Q8TC90 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCER1Q8TC90 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCER1Q8TC90 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCER1Q8TC90 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCER1Q8TC90 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCER1Q8TC90 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCER1Q8TC90 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCER1Q8TC90 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCER1Q8TC90 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCER1Q8TC90 AL359183.1-201ENST00000623796 2132 ntBASIC21.46■■□□□ 1.03
CCER1Q8TC90 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
CCER1Q8TC90 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCER1Q8TC90 DMBT1P1-203ENST00000636837 4628 ntBASIC21.45■■□□□ 1.02
CCER1Q8TC90 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCER1Q8TC90 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCER1Q8TC90 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCER1Q8TC90 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCER1Q8TC90 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCER1Q8TC90 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCER1Q8TC90 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 TMEM14DP-201ENST00000422205 345 ntBASIC21.45■■□□□ 1.02
CCER1Q8TC90 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCER1Q8TC90 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 AC008825.2-201ENST00000603374 718 ntBASIC21.45■■□□□ 1.02
CCER1Q8TC90 AL136301.1-201ENST00000615830 422 ntBASIC21.45■■□□□ 1.02
CCER1Q8TC90 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCER1Q8TC90 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCER1Q8TC90 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCER1Q8TC90 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCER1Q8TC90 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCER1Q8TC90 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCER1Q8TC90 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC21.45■■□□□ 1.02
CCER1Q8TC90 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCER1Q8TC90 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC21.44■■□□□ 1.02
CCER1Q8TC90 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCER1Q8TC90 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC21.44■■□□□ 1.02
CCER1Q8TC90 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CCER1Q8TC90 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CCER1Q8TC90 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCER1Q8TC90 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCER1Q8TC90 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCER1Q8TC90 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCER1Q8TC90 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CCER1Q8TC90 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CCER1Q8TC90 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCER1Q8TC90 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC21.44■■□□□ 1.02
CCER1Q8TC90 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CCER1Q8TC90 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCER1Q8TC90 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC21.44■■□□□ 1.02
CCER1Q8TC90 AL136309.1-201ENST00000403917 691 ntBASIC21.44■■□□□ 1.02
CCER1Q8TC90 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC21.44■■□□□ 1.02
CCER1Q8TC90 RGS5-214ENST00000429865 754 ntTSL 3 BASIC21.44■■□□□ 1.02
CCER1Q8TC90 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC21.44■■□□□ 1.02
CCER1Q8TC90 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC21.44■■□□□ 1.02
CCER1Q8TC90 POLE2-203ENST00000553805 496 ntTSL 2 BASIC21.44■■□□□ 1.02
CCER1Q8TC90 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC21.44■■□□□ 1.02
CCER1Q8TC90 AC008735.3-201ENST00000596646 500 ntBASIC21.44■■□□□ 1.02
CCER1Q8TC90 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC21.44■■□□□ 1.02
CCER1Q8TC90 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCER1Q8TC90 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCER1Q8TC90 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC21.44■■□□□ 1.02
CCER1Q8TC90 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC21.44■■□□□ 1.02
CCER1Q8TC90 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CCER1Q8TC90 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCER1Q8TC90 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CCER1Q8TC90 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCER1Q8TC90 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC21.44■■□□□ 1.02
CCER1Q8TC90 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCER1Q8TC90 FAS-202ENST00000352159 1722 ntTSL 5 BASIC21.43■■□□□ 1.02
CCER1Q8TC90 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCER1Q8TC90 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCER1Q8TC90 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCER1Q8TC90 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCER1Q8TC90 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCER1Q8TC90 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms