Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC093106.1-201ENST00000437271 352 ntBASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 AL009176.1-201ENST00000607876 650 ntBASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 GUCY2EP-203ENST00000531117 1918 ntBASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 SPTLC1P3-201ENST00000403408 259 ntBASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 AL137244.1-201ENST00000422931 865 ntBASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 VENTXP3-201ENST00000546480 773 ntBASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 SNRPD2P2-201ENST00000473818 333 ntBASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 MIR4265-201ENST00000582152 99 ntBASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 AC132812.1-201ENST00000583145 892 ntBASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 CLPP-205ENST00000596605 646 ntTSL 2 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 AL591471.1-201ENST00000621855 229 ntBASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CCDC168Q8NDH2 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.83□□□□□ -0.51
CCDC168Q8NDH2 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
CCDC168Q8NDH2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
CCDC168Q8NDH2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC11.83□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms