Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IRX3P78415 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.77■□□□□ 0.28
IRX3P78415 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.77■□□□□ 0.28
IRX3P78415 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
IRX3P78415 ST13P19-201ENST00000442505 1124 ntBASIC16.77■□□□□ 0.28
IRX3P78415 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
IRX3P78415 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
IRX3P78415 AC138701.2-201ENST00000553634 226 ntBASIC16.77■□□□□ 0.28
IRX3P78415 KRT8P1-201ENST00000557533 1207 ntBASIC16.77■□□□□ 0.28
IRX3P78415 RN7SL470P-201ENST00000583069 259 ntBASIC16.77■□□□□ 0.28
IRX3P78415 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.77■□□□□ 0.28
IRX3P78415 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
IRX3P78415 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
IRX3P78415 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
IRX3P78415 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.77■□□□□ 0.28
IRX3P78415 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
IRX3P78415 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
IRX3P78415 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
IRX3P78415 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
IRX3P78415 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
IRX3P78415 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
IRX3P78415 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
IRX3P78415 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
IRX3P78415 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.77■□□□□ 0.27
IRX3P78415 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
IRX3P78415 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
IRX3P78415 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
IRX3P78415 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
IRX3P78415 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX3P78415 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IRX3P78415 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX3P78415 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
IRX3P78415 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX3P78415 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX3P78415 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
IRX3P78415 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX3P78415 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX3P78415 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
IRX3P78415 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
IRX3P78415 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
IRX3P78415 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
IRX3P78415 HLA-DMA-203ENST00000395305 777 ntBASIC16.76■□□□□ 0.27
IRX3P78415 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IRX3P78415 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.76■□□□□ 0.27
IRX3P78415 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX3P78415 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.76■□□□□ 0.27
IRX3P78415 AL354861.1-201ENST00000445213 355 ntBASIC16.76■□□□□ 0.27
IRX3P78415 TMCO5B-205ENST00000530020 894 ntBASIC16.76■□□□□ 0.27
IRX3P78415 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.76■□□□□ 0.27
IRX3P78415 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
IRX3P78415 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.76■□□□□ 0.27
IRX3P78415 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC16.76■□□□□ 0.27
IRX3P78415 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX3P78415 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX3P78415 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX3P78415 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.76■□□□□ 0.27
IRX3P78415 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
IRX3P78415 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
IRX3P78415 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IRX3P78415 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX3P78415 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
IRX3P78415 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX3P78415 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX3P78415 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.76■□□□□ 0.27
IRX3P78415 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IRX3P78415 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX3P78415 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
IRX3P78415 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC16.75■□□□□ 0.27
IRX3P78415 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.75■□□□□ 0.27
IRX3P78415 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX3P78415 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.75■□□□□ 0.27
IRX3P78415 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.75■□□□□ 0.27
IRX3P78415 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.75■□□□□ 0.27
IRX3P78415 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
IRX3P78415 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IRX3P78415 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.75■□□□□ 0.27
IRX3P78415 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.75■□□□□ 0.27
IRX3P78415 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX3P78415 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX3P78415 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
IRX3P78415 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.75■□□□□ 0.27
IRX3P78415 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.75■□□□□ 0.27
IRX3P78415 AC073869.2-201ENST00000417338 1026 ntBASIC16.75■□□□□ 0.27
IRX3P78415 AC092638.2-201ENST00000441105 947 ntBASIC16.75■□□□□ 0.27
IRX3P78415 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IRX3P78415 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.75■□□□□ 0.27
IRX3P78415 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.75■□□□□ 0.27
IRX3P78415 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.75■□□□□ 0.27
IRX3P78415 AC105137.3-201ENST00000617588 984 ntBASIC16.75■□□□□ 0.27
IRX3P78415 AL591471.1-201ENST00000621855 229 ntBASIC16.75■□□□□ 0.27
IRX3P78415 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
IRX3P78415 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX3P78415 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX3P78415 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
IRX3P78415 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.75■□□□□ 0.27
IRX3P78415 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.75■□□□□ 0.27
IRX3P78415 AP002353.1-201ENST00000528257 1599 ntBASIC16.75■□□□□ 0.27
IRX3P78415 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
IRX3P78415 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX3P78415 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms