Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNTNAP1P78357 TPT1P11-201ENST00000458482 498 ntBASIC16.72■□□□□ 0.27
CNTNAP1P78357 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC16.72■□□□□ 0.27
CNTNAP1P78357 TMA16-204ENST00000508268 608 ntTSL 2 BASIC16.72■□□□□ 0.27
CNTNAP1P78357 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC16.72■□□□□ 0.27
CNTNAP1P78357 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CNTNAP1P78357 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC16.72■□□□□ 0.27
CNTNAP1P78357 AC021321.1-201ENST00000607397 1113 ntBASIC16.72■□□□□ 0.27
CNTNAP1P78357 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.72■□□□□ 0.27
CNTNAP1P78357 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC16.72■□□□□ 0.27
CNTNAP1P78357 AC117503.4-201ENST00000623229 1418 ntBASIC16.72■□□□□ 0.27
CNTNAP1P78357 TBC1D27-202ENST00000424239 1573 ntBASIC16.72■□□□□ 0.27
CNTNAP1P78357 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNTNAP1P78357 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNTNAP1P78357 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNTNAP1P78357 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNTNAP1P78357 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC16.72■□□□□ 0.27
CNTNAP1P78357 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNTNAP1P78357 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.71■□□□□ 0.27
CNTNAP1P78357 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNTNAP1P78357 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNTNAP1P78357 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNTNAP1P78357 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.71■□□□□ 0.27
CNTNAP1P78357 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNTNAP1P78357 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC16.71■□□□□ 0.27
CNTNAP1P78357 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CNTNAP1P78357 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CNTNAP1P78357 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNTNAP1P78357 GOLGA8UP-201ENST00000527159 1755 ntBASIC16.71■□□□□ 0.27
CNTNAP1P78357 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNTNAP1P78357 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.71■□□□□ 0.27
CNTNAP1P78357 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNTNAP1P78357 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNTNAP1P78357 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNTNAP1P78357 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNTNAP1P78357 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNTNAP1P78357 KRT8P6-201ENST00000399259 1207 ntBASIC16.71■□□□□ 0.27
CNTNAP1P78357 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CNTNAP1P78357 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC16.71■□□□□ 0.27
CNTNAP1P78357 AC022447.5-201ENST00000504817 392 ntBASIC16.71■□□□□ 0.27
CNTNAP1P78357 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNTNAP1P78357 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC16.71■□□□□ 0.27
CNTNAP1P78357 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.71■□□□□ 0.27
CNTNAP1P78357 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC16.71■□□□□ 0.27
CNTNAP1P78357 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC16.71■□□□□ 0.27
CNTNAP1P78357 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC16.71■□□□□ 0.27
CNTNAP1P78357 RN7SL556P-201ENST00000582856 298 ntBASIC16.71■□□□□ 0.27
CNTNAP1P78357 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC16.71■□□□□ 0.27
CNTNAP1P78357 AP001462.1-201ENST00000594089 452 ntBASIC16.71■□□□□ 0.27
CNTNAP1P78357 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNTNAP1P78357 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNTNAP1P78357 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CNTNAP1P78357 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.71■□□□□ 0.27
CNTNAP1P78357 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNTNAP1P78357 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNTNAP1P78357 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CNTNAP1P78357 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNTNAP1P78357 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CNTNAP1P78357 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
CNTNAP1P78357 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CNTNAP1P78357 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
CNTNAP1P78357 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
CNTNAP1P78357 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CNTNAP1P78357 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CNTNAP1P78357 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNTNAP1P78357 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNTNAP1P78357 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNTNAP1P78357 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNTNAP1P78357 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.7■□□□□ 0.26
CNTNAP1P78357 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNTNAP1P78357 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNTNAP1P78357 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC16.7■□□□□ 0.26
CNTNAP1P78357 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNTNAP1P78357 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNTNAP1P78357 AC090505.1-201ENST00000430515 1834 ntBASIC16.7■□□□□ 0.26
CNTNAP1P78357 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNTNAP1P78357 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNTNAP1P78357 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNTNAP1P78357 KRT18P44-201ENST00000416086 1285 ntBASIC16.7■□□□□ 0.26
CNTNAP1P78357 HNRNPA1P21-201ENST00000424115 961 ntBASIC16.7■□□□□ 0.26
CNTNAP1P78357 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNTNAP1P78357 POLR2LP1-206ENST00000444785 187 ntBASIC16.7■□□□□ 0.26
CNTNAP1P78357 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC16.7■□□□□ 0.26
CNTNAP1P78357 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CNTNAP1P78357 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC16.7■□□□□ 0.26
CNTNAP1P78357 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNTNAP1P78357 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC16.7■□□□□ 0.26
CNTNAP1P78357 CLPP-205ENST00000596605 646 ntTSL 2 BASIC16.7■□□□□ 0.26
CNTNAP1P78357 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNTNAP1P78357 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC16.7■□□□□ 0.26
CNTNAP1P78357 AL031673.1-201ENST00000611460 466 ntBASIC16.7■□□□□ 0.26
CNTNAP1P78357 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC16.7■□□□□ 0.26
CNTNAP1P78357 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC16.7■□□□□ 0.26
CNTNAP1P78357 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC16.7■□□□□ 0.26
CNTNAP1P78357 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC16.7■□□□□ 0.26
CNTNAP1P78357 BX322534.1-201ENST00000635574 241 ntBASIC16.7■□□□□ 0.26
CNTNAP1P78357 AC215524.1-201ENST00000635696 241 ntBASIC16.7■□□□□ 0.26
CNTNAP1P78357 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC16.7■□□□□ 0.26
CNTNAP1P78357 ESR1-214ENST00000638569 132 ntTSL 5 BASIC16.7■□□□□ 0.26
CNTNAP1P78357 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms