Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
LMNAP02545 ACE3P-201ENST00000423435 1973 ntBASIC15.13■□□□□ 0.01
LMNAP02545 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LMNAP02545 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.12■□□□□ 0.01
LMNAP02545 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.12■□□□□ 0.01
LMNAP02545 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
LMNAP02545 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
LMNAP02545 AC097359.2-201ENST00000604992 2389 ntBASIC15.12■□□□□ 0.01
LMNAP02545 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.12■□□□□ 0.01
LMNAP02545 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.12■□□□□ 0.01
LMNAP02545 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LMNAP02545 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC15.12■□□□□ 0.01
LMNAP02545 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC15.12■□□□□ 0.01
LMNAP02545 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 AP000356.3-201ENST00000382243 753 ntBASIC15.12■□□□□ 0.01
LMNAP02545 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.12■□□□□ 0.01
LMNAP02545 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC15.12■□□□□ 0.01
LMNAP02545 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC15.12■□□□□ 0.01
LMNAP02545 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.12■□□□□ 0.01
LMNAP02545 POU5F1P2-201ENST00000521750 823 ntBASIC15.12■□□□□ 0.01
LMNAP02545 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LMNAP02545 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.12■□□□□ 0.01
LMNAP02545 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.12■□□□□ 0.01
LMNAP02545 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.12■□□□□ 0.01
LMNAP02545 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
LMNAP02545 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.12■□□□□ 0.01
LMNAP02545 AP003392.6-201ENST00000607709 325 ntBASIC15.12■□□□□ 0.01
LMNAP02545 FO393412.1-201ENST00000619841 382 ntBASIC15.12■□□□□ 0.01
LMNAP02545 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LMNAP02545 AC134407.2-201ENST00000625089 1978 ntBASIC15.12■□□□□ 0.01
LMNAP02545 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.12■□□□□ 0.01
LMNAP02545 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LMNAP02545 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LMNAP02545 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
LMNAP02545 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LMNAP02545 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
LMNAP02545 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.12■□□□□ 0.01
LMNAP02545 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
LMNAP02545 CR383656.2-201ENST00000548656 2254 ntBASIC15.12■□□□□ 0.01
LMNAP02545 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.11■□□□□ 0.01
LMNAP02545 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
LMNAP02545 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.11■□□□□ 0.01
LMNAP02545 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
LMNAP02545 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LMNAP02545 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC15.11■□□□□ 0.01
LMNAP02545 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.11■□□□□ 0.01
LMNAP02545 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.11■□□□□ 0.01
LMNAP02545 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.11■□□□□ 0.01
LMNAP02545 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC15.11■□□□□ 0.01
LMNAP02545 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC15.11■□□□□ 0.01
LMNAP02545 AC073150.1-201ENST00000450406 1084 ntBASIC15.11■□□□□ 0.01
LMNAP02545 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.11■□□□□ 0.01
LMNAP02545 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 ALG1L13P-202ENST00000519320 584 ntBASIC15.11■□□□□ 0.01
LMNAP02545 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.11■□□□□ 0.01
LMNAP02545 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.11■□□□□ 0.01
LMNAP02545 AC005324.6-201ENST00000587972 613 ntBASIC15.11■□□□□ 0.01
LMNAP02545 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.11■□□□□ 0.01
LMNAP02545 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.11■□□□□ 0.01
LMNAP02545 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.11■□□□□ 0.01
LMNAP02545 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms