Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.85□□□□□ -0.35
CNOT4O95628 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.85□□□□□ -0.35
CNOT4O95628 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CNOT4O95628 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.85□□□□□ -0.35
CNOT4O95628 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CNOT4O95628 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CNOT4O95628 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.84□□□□□ -0.35
CNOT4O95628 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CNOT4O95628 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.84□□□□□ -0.35
CNOT4O95628 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CNOT4O95628 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.84□□□□□ -0.35
CNOT4O95628 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CNOT4O95628 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CNOT4O95628 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CNOT4O95628 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CNOT4O95628 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CNOT4O95628 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.84□□□□□ -0.35
CNOT4O95628 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.84□□□□□ -0.35
CNOT4O95628 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CNOT4O95628 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.84□□□□□ -0.35
CNOT4O95628 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CNOT4O95628 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CNOT4O95628 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CNOT4O95628 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CNOT4O95628 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.84□□□□□ -0.35
CNOT4O95628 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.84□□□□□ -0.35
CNOT4O95628 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CNOT4O95628 ST13P19-201ENST00000442505 1124 ntBASIC12.84□□□□□ -0.35
CNOT4O95628 Z97180.1-201ENST00000445173 988 ntBASIC12.84□□□□□ -0.35
CNOT4O95628 MAGEA5-201ENST00000446757 942 ntBASIC12.84□□□□□ -0.35
CNOT4O95628 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CNOT4O95628 RPS2P36-201ENST00000456516 831 ntBASIC12.84□□□□□ -0.35
CNOT4O95628 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CNOT4O95628 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CNOT4O95628 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.84□□□□□ -0.35
CNOT4O95628 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.84□□□□□ -0.35
CNOT4O95628 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.84□□□□□ -0.35
CNOT4O95628 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC12.84□□□□□ -0.35
CNOT4O95628 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.84□□□□□ -0.35
CNOT4O95628 U62317.3-201ENST00000608319 855 ntBASIC12.84□□□□□ -0.35
CNOT4O95628 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.84□□□□□ -0.35
CNOT4O95628 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.84□□□□□ -0.35
CNOT4O95628 AC128714.1-201ENST00000637035 887 ntBASIC12.84□□□□□ -0.35
CNOT4O95628 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CNOT4O95628 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CNOT4O95628 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CNOT4O95628 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.84□□□□□ -0.35
CNOT4O95628 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CNOT4O95628 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CNOT4O95628 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.84□□□□□ -0.35
CNOT4O95628 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CNOT4O95628 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
CNOT4O95628 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CNOT4O95628 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CNOT4O95628 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CNOT4O95628 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CNOT4O95628 AC006504.5-208ENST00000588784 2401 ntBASIC12.83□□□□□ -0.35
CNOT4O95628 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
CNOT4O95628 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
CNOT4O95628 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CNOT4O95628 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
CNOT4O95628 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.83□□□□□ -0.35
CNOT4O95628 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CNOT4O95628 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
CNOT4O95628 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNOT4O95628 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNOT4O95628 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNOT4O95628 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.83□□□□□ -0.36
CNOT4O95628 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNOT4O95628 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CNOT4O95628 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNOT4O95628 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNOT4O95628 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CNOT4O95628 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNOT4O95628 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CNOT4O95628 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.83□□□□□ -0.36
CNOT4O95628 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.83□□□□□ -0.36
CNOT4O95628 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.83□□□□□ -0.36
CNOT4O95628 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CNOT4O95628 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNOT4O95628 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CNOT4O95628 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CNOT4O95628 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC12.83□□□□□ -0.36
CNOT4O95628 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.83□□□□□ -0.36
CNOT4O95628 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.83□□□□□ -0.36
CNOT4O95628 AC022447.6-201ENST00000515522 438 ntBASIC12.83□□□□□ -0.36
CNOT4O95628 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.83□□□□□ -0.36
CNOT4O95628 AC003686.1-201ENST00000550956 1034 ntBASIC12.83□□□□□ -0.36
CNOT4O95628 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC12.83□□□□□ -0.36
CNOT4O95628 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CNOT4O95628 NAT9-224ENST00000583757 583 ntTSL 3 BASIC12.83□□□□□ -0.36
CNOT4O95628 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC12.83□□□□□ -0.36
CNOT4O95628 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.83□□□□□ -0.36
CNOT4O95628 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
CNOT4O95628 AC091544.8-201ENST00000619490 361 ntBASIC12.83□□□□□ -0.36
CNOT4O95628 AL353726.2-201ENST00000623259 884 ntBASIC12.83□□□□□ -0.36
CNOT4O95628 NAP1L6-202ENST00000641404 1222 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms