Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SMAD6O43541 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.41□□□□□ -0.1
SMAD6O43541 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SMAD6O43541 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMAD6O43541 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.41□□□□□ -0.1
SMAD6O43541 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMAD6O43541 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
SMAD6O43541 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMAD6O43541 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMAD6O43541 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMAD6O43541 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMAD6O43541 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.41□□□□□ -0.1
SMAD6O43541 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMAD6O43541 GRK6P1-201ENST00000400595 1711 ntBASIC14.41□□□□□ -0.1
SMAD6O43541 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMAD6O43541 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SMAD6O43541 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SMAD6O43541 SHMT1P1-201ENST00000419974 1312 ntBASIC14.41□□□□□ -0.1
SMAD6O43541 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMAD6O43541 AL157996.1-201ENST00000624684 2299 ntBASIC14.4□□□□□ -0.1
SMAD6O43541 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.4□□□□□ -0.1
SMAD6O43541 OR2I1P-210ENST00000642037 4691 ntBASIC14.4□□□□□ -0.1
SMAD6O43541 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SMAD6O43541 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMAD6O43541 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SMAD6O43541 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SMAD6O43541 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMAD6O43541 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SMAD6O43541 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.4□□□□□ -0.1
SMAD6O43541 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.4□□□□□ -0.1
SMAD6O43541 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMAD6O43541 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SMAD6O43541 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMAD6O43541 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMAD6O43541 AL512430.1-201ENST00000392575 860 ntBASIC14.4□□□□□ -0.1
SMAD6O43541 HINT2P1-201ENST00000419438 481 ntBASIC14.4□□□□□ -0.1
SMAD6O43541 FTLP1-201ENST00000449155 526 ntBASIC14.4□□□□□ -0.1
SMAD6O43541 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.4□□□□□ -0.1
SMAD6O43541 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMAD6O43541 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.4□□□□□ -0.1
SMAD6O43541 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.4□□□□□ -0.1
SMAD6O43541 NDUFB10P1-201ENST00000567319 521 ntBASIC14.4□□□□□ -0.1
SMAD6O43541 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SMAD6O43541 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.4□□□□□ -0.1
SMAD6O43541 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.4□□□□□ -0.1
SMAD6O43541 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMAD6O43541 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
SMAD6O43541 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.4□□□□□ -0.1
SMAD6O43541 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
SMAD6O43541 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.4□□□□□ -0.1
SMAD6O43541 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMAD6O43541 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SMAD6O43541 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMAD6O43541 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SMAD6O43541 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMAD6O43541 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMAD6O43541 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMAD6O43541 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMAD6O43541 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SMAD6O43541 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMAD6O43541 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMAD6O43541 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.4□□□□□ -0.1
SMAD6O43541 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.4□□□□□ -0.1
SMAD6O43541 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMAD6O43541 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
SMAD6O43541 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SMAD6O43541 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMAD6O43541 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMAD6O43541 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMAD6O43541 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMAD6O43541 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMAD6O43541 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMAD6O43541 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SMAD6O43541 RPL13AP3-202ENST00000494676 1473 ntBASIC14.39□□□□□ -0.11
SMAD6O43541 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.39□□□□□ -0.11
SMAD6O43541 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMAD6O43541 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.39□□□□□ -0.11
SMAD6O43541 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.39□□□□□ -0.11
SMAD6O43541 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMAD6O43541 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMAD6O43541 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.39□□□□□ -0.11
SMAD6O43541 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMAD6O43541 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMAD6O43541 AP000356.3-201ENST00000382243 753 ntBASIC14.39□□□□□ -0.11
SMAD6O43541 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMAD6O43541 AC006987.1-201ENST00000413610 527 ntBASIC14.39□□□□□ -0.11
SMAD6O43541 HMGA1P1-201ENST00000415560 1062 ntBASIC14.39□□□□□ -0.11
SMAD6O43541 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMAD6O43541 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.39□□□□□ -0.11
SMAD6O43541 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMAD6O43541 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.39□□□□□ -0.11
SMAD6O43541 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.39□□□□□ -0.11
SMAD6O43541 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.39□□□□□ -0.11
SMAD6O43541 RPL18AP8-201ENST00000486071 528 ntBASIC14.39□□□□□ -0.11
SMAD6O43541 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.39□□□□□ -0.11
SMAD6O43541 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.39□□□□□ -0.11
SMAD6O43541 AC095040.1-201ENST00000513286 675 ntBASIC14.39□□□□□ -0.11
SMAD6O43541 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.39□□□□□ -0.11
SMAD6O43541 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
SMAD6O43541 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms