Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 MYADML-201ENST00000474610 2147 ntBASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 AC215219.1-201ENST00000400706 1817 ntBASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 IGLV3-21-201ENST00000390308 602 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 AC011773.4-202ENST00000566000 1264 ntBASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 B9D1-213ENST00000575403 928 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 AL356423.1-201ENST00000604953 538 ntBASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RIMBP3Q9UFD9 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 NFKBIA-208ENST00000557140 1400 ntTSL 5 BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 ADK-205ENST00000539909 1866 ntTSL 2 BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 NTF3-201ENST00000331010 1028 ntAPPRIS P3 BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 LYPD4-201ENST00000343055 1051 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 PAGE4-202ENST00000376141 487 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 TINF2-210ENST00000559019 885 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 LINC02074-201ENST00000581028 569 ntTSL 4 BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 SNORD55-201ENST00000581525 80 ntBASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 LINC02074-202ENST00000584003 573 ntTSL 4 BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 LYPD4-202ENST00000601246 1076 ntTSL 5 BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 AL355353.1-201ENST00000604014 330 ntBASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 AC089987.1-201ENST00000551654 2209 ntBASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RIMBP3Q9UFD9 DDX39B-201ENST00000376177 1529 ntTSL 5 BASIC21.52■■□□□ 1.03
RIMBP3Q9UFD9 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 AC023590.1-202ENST00000366457 781 ntTSL 3 BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 PLPP4-201ENST00000369073 1135 ntTSL 5 BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 SNCG-202ENST00000372017 701 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 POLR1C-202ENST00000372344 1119 ntTSL 5 BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 PRSS3-203ENST00000379405 834 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 CTF2P-201ENST00000412003 604 ntBASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 AC005154.1-227ENST00000579174 755 ntTSL 3 BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 AC104982.2-201ENST00000584258 893 ntTSL 5 BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 RN7SL238P-201ENST00000613832 290 ntBASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 Metazoa_SRP.139-201ENST00000616096 290 ntBASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 RN7SL106P-201ENST00000618104 290 ntBASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 ACE3P-201ENST00000423435 1973 ntBASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 C1orf158-201ENST00000376210 695 ntTSL 3 BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 ARF1P2-201ENST00000392493 538 ntBASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 ALDOAP2-201ENST00000398050 1076 ntBASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 PPP3CB-AS1-201ENST00000422977 930 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 TXNDC9-205ENST00000434323 733 ntTSL 5 BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 CMTM1-206ENST00000457188 765 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 EXOSC1-210ENST00000485122 564 ntTSL 5 BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 CLNS1A-202ENST00000525064 1121 ntTSL 3 BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 CMTM1-215ENST00000531885 590 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 MPHOSPH6-203ENST00000563504 617 ntTSL 2 BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 AC004832.1-204ENST00000610737 1018 ntTSL 5 BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RIMBP3Q9UFD9 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RIMBP3Q9UFD9 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms