Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 AC091046.1-201ENST00000331871 207 ntBASIC14.36□□□□□ -0.11
SPASTQ9UBP0 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 IGLV3-15-201ENST00000518356 244 ntBASIC14.36□□□□□ -0.11
SPASTQ9UBP0 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 PRKXP1-201ENST00000561423 1122 ntBASIC14.36□□□□□ -0.11
SPASTQ9UBP0 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 MIR4754-201ENST00000582477 89 ntBASIC14.36□□□□□ -0.11
SPASTQ9UBP0 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 AC041040.2-201ENST00000622926 2899 ntBASIC14.36□□□□□ -0.11
SPASTQ9UBP0 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SPASTQ9UBP0 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 CYP4F23P-201ENST00000593402 1579 ntBASIC14.35□□□□□ -0.11
SPASTQ9UBP0 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 AC009093.10-201ENST00000641956 1442 ntBASIC14.35□□□□□ -0.11
SPASTQ9UBP0 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 FRMPD2B-201ENST00000431305 1347 ntBASIC14.35□□□□□ -0.11
SPASTQ9UBP0 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.35□□□□□ -0.11
SPASTQ9UBP0 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
SPASTQ9UBP0 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPASTQ9UBP0 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms