Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 AC009542.2-202ENST00000619004 1067 ntBASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 CR383656.2-201ENST00000548656 2254 ntBASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 BEND3P3-201ENST00000611030 2440 ntBASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.11□□□□□ -0.31
RSPO3Q9BXY4 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 LINC01165-201ENST00000445190 1623 ntBASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 AL391647.1-201ENST00000395664 511 ntBASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 FAM58BP-201ENST00000439056 645 ntBASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 GOLGA2P4-201ENST00000441462 777 ntBASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 HILS1-202ENST00000545329 423 ntBASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 BNIP3P13-201ENST00000599968 566 ntBASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 AL591471.1-201ENST00000621855 229 ntBASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms