Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 RN7SKP230-201ENST00000365642 335 ntBASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 AC245100.3-201ENST00000441281 285 ntBASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 AC093433.1-201ENST00000458048 571 ntBASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 MESTP3-201ENST00000503460 968 ntBASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 AC020910.5-201ENST00000623668 1865 ntBASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 KHSRPP1-201ENST00000427983 1768 ntBASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DNAAF1Q8NEP3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 AC139712.1-201ENST00000378256 1875 ntBASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 TUBB8P4-201ENST00000511806 1324 ntBASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 SORD2P-201ENST00000558556 1069 ntBASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 AC103988.2-201ENST00000561804 725 ntBASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 AC140912.1-201ENST00000577171 1054 ntBASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 LINC02560-201ENST00000596379 459 ntBASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 AC138696.2-201ENST00000607376 223 ntBASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
DNAAF1Q8NEP3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms