Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VARS2Q5ST30 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 EAF2-202ENST00000451944 960 ntTSL 2 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 PTP4A2-201ENST00000457805 1032 ntTSL 2 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 RN7SL81P-201ENST00000493781 261 ntBASIC15.25■□□□□ 0.03
VARS2Q5ST30 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 MRPL22P1-201ENST00000505398 616 ntBASIC15.25■□□□□ 0.03
VARS2Q5ST30 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 AC013470.4-201ENST00000619978 986 ntBASIC15.25■□□□□ 0.03
VARS2Q5ST30 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARS2Q5ST30 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VARS2Q5ST30 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARS2Q5ST30 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARS2Q5ST30 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 AC113367.3-201ENST00000508316 1912 ntBASIC15.25■□□□□ 0.03
VARS2Q5ST30 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VARS2Q5ST30 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
VARS2Q5ST30 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
VARS2Q5ST30 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
VARS2Q5ST30 INTS4P1-203ENST00000641008 3683 ntBASIC15.24■□□□□ 0.03
VARS2Q5ST30 AC063926.3-201ENST00000624734 5658 ntBASIC15.24■□□□□ 0.03
VARS2Q5ST30 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
VARS2Q5ST30 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.24■□□□□ 0.03
VARS2Q5ST30 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARS2Q5ST30 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.24■□□□□ 0.03
VARS2Q5ST30 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARS2Q5ST30 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
VARS2Q5ST30 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARS2Q5ST30 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VARS2Q5ST30 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC15.24■□□□□ 0.03
VARS2Q5ST30 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VARS2Q5ST30 MIR645-201ENST00000385283 94 ntBASIC15.24■□□□□ 0.03
VARS2Q5ST30 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC15.24■□□□□ 0.03
VARS2Q5ST30 ORAOV1P1-201ENST00000503108 395 ntBASIC15.24■□□□□ 0.03
VARS2Q5ST30 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.24■□□□□ 0.03
VARS2Q5ST30 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.24■□□□□ 0.03
VARS2Q5ST30 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VARS2Q5ST30 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.24■□□□□ 0.03
VARS2Q5ST30 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.24■□□□□ 0.03
VARS2Q5ST30 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.24■□□□□ 0.03
VARS2Q5ST30 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
VARS2Q5ST30 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARS2Q5ST30 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.24■□□□□ 0.03
VARS2Q5ST30 RPL17P45-201ENST00000586289 509 ntBASIC15.24■□□□□ 0.03
VARS2Q5ST30 ZNF92P3-201ENST00000596594 954 ntBASIC15.24■□□□□ 0.03
VARS2Q5ST30 AP001065.2-201ENST00000617205 644 ntBASIC15.24■□□□□ 0.03
VARS2Q5ST30 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VARS2Q5ST30 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.24■□□□□ 0.03
VARS2Q5ST30 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
VARS2Q5ST30 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
VARS2Q5ST30 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VARS2Q5ST30 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VARS2Q5ST30 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
VARS2Q5ST30 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARS2Q5ST30 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
VARS2Q5ST30 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARS2Q5ST30 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARS2Q5ST30 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VARS2Q5ST30 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARS2Q5ST30 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARS2Q5ST30 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARS2Q5ST30 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARS2Q5ST30 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARS2Q5ST30 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARS2Q5ST30 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARS2Q5ST30 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARS2Q5ST30 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VARS2Q5ST30 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 AL121949.1-201ENST00000402043 968 ntBASIC15.23■□□□□ 0.03
VARS2Q5ST30 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VARS2Q5ST30 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 RPL7P35-201ENST00000446943 740 ntBASIC15.23■□□□□ 0.03
VARS2Q5ST30 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VARS2Q5ST30 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC15.23■□□□□ 0.03
VARS2Q5ST30 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms