Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 RN7SL560P-201ENST00000577943 264 ntBASIC12.56□□□□□ -0.4
HIST1H3AP68431 KRT18P8-201ENST00000581937 1246 ntBASIC12.56□□□□□ -0.4
HIST1H3AP68431 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 BNIP3P29-201ENST00000598302 571 ntBASIC12.56□□□□□ -0.4
HIST1H3AP68431 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 AC011447.5-201ENST00000616168 564 ntBASIC12.56□□□□□ -0.4
HIST1H3AP68431 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.56□□□□□ -0.4
HIST1H3AP68431 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HIST1H3AP68431 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H3AP68431 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 AC107918.4-201ENST00000641966 3141 ntBASIC12.55□□□□□ -0.4
HIST1H3AP68431 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H3AP68431 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H3AP68431 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H3AP68431 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H3AP68431 AC018629.1-201ENST00000623381 1736 ntBASIC12.55□□□□□ -0.4
HIST1H3AP68431 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H3AP68431 OR8S1-201ENST00000310194 1080 ntBASIC12.55□□□□□ -0.4
HIST1H3AP68431 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H3AP68431 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.55□□□□□ -0.4
HIST1H3AP68431 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H3AP68431 AC092580.1-201ENST00000433998 658 ntBASIC12.55□□□□□ -0.4
HIST1H3AP68431 AK2P2-201ENST00000439142 405 ntBASIC12.55□□□□□ -0.4
HIST1H3AP68431 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 RPL13AP20-201ENST00000459725 609 ntBASIC12.55□□□□□ -0.4
HIST1H3AP68431 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 AC021723.1-201ENST00000486306 515 ntBASIC12.55□□□□□ -0.4
HIST1H3AP68431 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 AL583810.1-201ENST00000553344 1045 ntBASIC12.55□□□□□ -0.4
HIST1H3AP68431 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H3AP68431 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H3AP68431 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H3AP68431 AC111170.3-201ENST00000624282 2464 ntBASIC12.55□□□□□ -0.4
HIST1H3AP68431 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H3AP68431 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H3AP68431 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H3AP68431 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H3AP68431 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H3AP68431 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H3AP68431 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H3AP68431 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
HIST1H3AP68431 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
HIST1H3AP68431 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms