Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC12.9□□□□□ -0.34
VBP1P61758 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
VBP1P61758 AC064801.2-201ENST00000625052 1303 ntBASIC12.9□□□□□ -0.34
VBP1P61758 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 AC104109.2-201ENST00000602919 1418 ntBASIC12.9□□□□□ -0.34
VBP1P61758 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.9□□□□□ -0.34
VBP1P61758 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.9□□□□□ -0.34
VBP1P61758 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.9□□□□□ -0.34
VBP1P61758 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.9□□□□□ -0.34
VBP1P61758 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.9□□□□□ -0.34
VBP1P61758 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
VBP1P61758 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.9□□□□□ -0.34
VBP1P61758 UPK3BP1-201ENST00000428678 509 ntBASIC12.9□□□□□ -0.34
VBP1P61758 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.9□□□□□ -0.34
VBP1P61758 AC003958.1-201ENST00000435883 421 ntBASIC12.9□□□□□ -0.34
VBP1P61758 AC079781.3-201ENST00000449110 356 ntBASIC12.9□□□□□ -0.34
VBP1P61758 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
VBP1P61758 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.9□□□□□ -0.34
VBP1P61758 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.9□□□□□ -0.34
VBP1P61758 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.34
VBP1P61758 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.9□□□□□ -0.34
VBP1P61758 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.9□□□□□ -0.34
VBP1P61758 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
VBP1P61758 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
VBP1P61758 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC12.9□□□□□ -0.34
VBP1P61758 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC12.9□□□□□ -0.34
VBP1P61758 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
VBP1P61758 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VBP1P61758 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
VBP1P61758 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
VBP1P61758 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
VBP1P61758 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 AC073862.5-201ENST00000624129 2027 ntBASIC12.89□□□□□ -0.35
VBP1P61758 AC092028.1-202ENST00000641483 3547 ntBASIC12.89□□□□□ -0.35
VBP1P61758 AC092028.1-201ENST00000641781 3540 ntBASIC12.89□□□□□ -0.35
VBP1P61758 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 AL138799.1-201ENST00000448213 1675 ntBASIC12.89□□□□□ -0.35
VBP1P61758 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
VBP1P61758 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.89□□□□□ -0.35
VBP1P61758 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
VBP1P61758 AC134407.3-201ENST00000624035 2139 ntBASIC12.89□□□□□ -0.35
VBP1P61758 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.89□□□□□ -0.35
VBP1P61758 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
VBP1P61758 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
VBP1P61758 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
VBP1P61758 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
VBP1P61758 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
VBP1P61758 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.89□□□□□ -0.35
VBP1P61758 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 AL080243.2-201ENST00000418783 582 ntBASIC12.89□□□□□ -0.35
VBP1P61758 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.89□□□□□ -0.35
VBP1P61758 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.89□□□□□ -0.35
VBP1P61758 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.89□□□□□ -0.35
VBP1P61758 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.89□□□□□ -0.35
VBP1P61758 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.89□□□□□ -0.35
VBP1P61758 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.89□□□□□ -0.35
VBP1P61758 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
VBP1P61758 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.89□□□□□ -0.35
VBP1P61758 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.89□□□□□ -0.35
VBP1P61758 AC004461.2-201ENST00000629517 803 ntBASIC12.89□□□□□ -0.35
VBP1P61758 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
VBP1P61758 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VBP1P61758 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms