Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.17□□□□□ -0.14
CDKN2DP55273 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.17□□□□□ -0.14
CDKN2DP55273 AC005324.6-201ENST00000587972 613 ntBASIC14.17□□□□□ -0.14
CDKN2DP55273 AC008805.1-201ENST00000590892 364 ntBASIC14.17□□□□□ -0.14
CDKN2DP55273 AL096828.3-201ENST00000615354 462 ntBASIC14.17□□□□□ -0.14
CDKN2DP55273 AL591471.1-201ENST00000621855 229 ntBASIC14.17□□□□□ -0.14
CDKN2DP55273 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.17□□□□□ -0.14
CDKN2DP55273 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 AC018629.1-201ENST00000623381 1736 ntBASIC14.17□□□□□ -0.14
CDKN2DP55273 FAM90A7P-201ENST00000382628 1395 ntBASIC14.17□□□□□ -0.14
CDKN2DP55273 FAM90A23P-201ENST00000400136 1395 ntBASIC14.17□□□□□ -0.14
CDKN2DP55273 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CDKN2DP55273 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.17□□□□□ -0.14
CDKN2DP55273 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CDKN2DP55273 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.17□□□□□ -0.14
CDKN2DP55273 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
CDKN2DP55273 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDKN2DP55273 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.16□□□□□ -0.14
CDKN2DP55273 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.16□□□□□ -0.14
CDKN2DP55273 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDKN2DP55273 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
CDKN2DP55273 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.16□□□□□ -0.14
CDKN2DP55273 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CDKN2DP55273 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.16□□□□□ -0.14
CDKN2DP55273 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDKN2DP55273 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
CDKN2DP55273 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.16□□□□□ -0.14
CDKN2DP55273 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CDKN2DP55273 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 FAM21FP-201ENST00000426241 1131 ntBASIC14.16□□□□□ -0.14
CDKN2DP55273 AC092580.1-201ENST00000433998 658 ntBASIC14.16□□□□□ -0.14
CDKN2DP55273 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.16□□□□□ -0.14
CDKN2DP55273 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.16□□□□□ -0.14
CDKN2DP55273 Z93015.1-201ENST00000451718 390 ntBASIC14.16□□□□□ -0.14
CDKN2DP55273 BNIP3P42-201ENST00000454982 569 ntBASIC14.16□□□□□ -0.14
CDKN2DP55273 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDKN2DP55273 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.16□□□□□ -0.14
CDKN2DP55273 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
CDKN2DP55273 BNIP3P29-201ENST00000598302 571 ntBASIC14.16□□□□□ -0.14
CDKN2DP55273 AC011447.5-201ENST00000616168 564 ntBASIC14.16□□□□□ -0.14
CDKN2DP55273 AC092299.1-201ENST00000632679 757 ntBASIC14.16□□□□□ -0.14
CDKN2DP55273 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.16□□□□□ -0.14
CDKN2DP55273 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
CDKN2DP55273 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CDKN2DP55273 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CDKN2DP55273 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDKN2DP55273 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDKN2DP55273 AC073869.1-201ENST00000415574 2762 ntBASIC14.16□□□□□ -0.14
CDKN2DP55273 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CDKN2DP55273 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDKN2DP55273 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.15□□□□□ -0.14
CDKN2DP55273 LINC00115-201ENST00000473798 1317 ntBASIC14.15□□□□□ -0.14
CDKN2DP55273 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CDKN2DP55273 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.15□□□□□ -0.14
CDKN2DP55273 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDKN2DP55273 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CDKN2DP55273 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CDKN2DP55273 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.15□□□□□ -0.14
CDKN2DP55273 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.15□□□□□ -0.14
CDKN2DP55273 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms