Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.41□□□□□ -0.1
HOXD12P35452 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.41□□□□□ -0.1
HOXD12P35452 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HOXD12P35452 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXD12P35452 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXD12P35452 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXD12P35452 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HOXD12P35452 HLA-DMA-203ENST00000395305 777 ntBASIC14.41□□□□□ -0.1
HOXD12P35452 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC14.41□□□□□ -0.1
HOXD12P35452 DUX4L50-201ENST00000455245 715 ntBASIC14.41□□□□□ -0.1
HOXD12P35452 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HOXD12P35452 AREG-202ENST00000502307 956 ntTSL 5 BASIC14.41□□□□□ -0.1
HOXD12P35452 ALG1L6P-201ENST00000515248 758 ntBASIC14.41□□□□□ -0.1
HOXD12P35452 PTK2-225ENST00000520892 571 ntTSL 4 BASIC14.41□□□□□ -0.1
HOXD12P35452 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.41□□□□□ -0.1
HOXD12P35452 AP000911.2-201ENST00000534330 502 ntBASIC14.41□□□□□ -0.1
HOXD12P35452 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.41□□□□□ -0.1
HOXD12P35452 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC14.41□□□□□ -0.1
HOXD12P35452 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC14.41□□□□□ -0.1
HOXD12P35452 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXD12P35452 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC14.41□□□□□ -0.1
HOXD12P35452 FO393412.1-201ENST00000619841 382 ntBASIC14.41□□□□□ -0.1
HOXD12P35452 AC073911.3-201ENST00000624401 631 ntBASIC14.41□□□□□ -0.1
HOXD12P35452 AC005618.3-201ENST00000624928 458 ntBASIC14.41□□□□□ -0.1
HOXD12P35452 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.41□□□□□ -0.1
HOXD12P35452 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXD12P35452 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXD12P35452 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
HOXD12P35452 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.41□□□□□ -0.1
HOXD12P35452 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXD12P35452 TMBIM7P-202ENST00000641474 1516 ntBASIC14.41□□□□□ -0.1
HOXD12P35452 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
HOXD12P35452 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXD12P35452 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HOXD12P35452 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.4□□□□□ -0.1
HOXD12P35452 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
HOXD12P35452 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HOXD12P35452 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.4□□□□□ -0.1
HOXD12P35452 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HOXD12P35452 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXD12P35452 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXD12P35452 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXD12P35452 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HOXD12P35452 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
HOXD12P35452 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXD12P35452 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXD12P35452 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.4□□□□□ -0.1
HOXD12P35452 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXD12P35452 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.4□□□□□ -0.1
HOXD12P35452 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
HOXD12P35452 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXD12P35452 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXD12P35452 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC14.4□□□□□ -0.1
HOXD12P35452 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC14.4□□□□□ -0.1
HOXD12P35452 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HOXD12P35452 OR2R1P-201ENST00000441404 914 ntBASIC14.4□□□□□ -0.1
HOXD12P35452 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.4□□□□□ -0.1
HOXD12P35452 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.4□□□□□ -0.1
HOXD12P35452 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC14.4□□□□□ -0.1
HOXD12P35452 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC14.4□□□□□ -0.1
HOXD12P35452 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.4□□□□□ -0.1
HOXD12P35452 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXD12P35452 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
HOXD12P35452 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
HOXD12P35452 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
HOXD12P35452 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.4□□□□□ -0.1
HOXD12P35452 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.4□□□□□ -0.1
HOXD12P35452 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HOXD12P35452 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXD12P35452 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HOXD12P35452 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.4□□□□□ -0.1
HOXD12P35452 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HOXD12P35452 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
HOXD12P35452 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXD12P35452 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HOXD12P35452 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXD12P35452 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.4□□□□□ -0.1
HOXD12P35452 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXD12P35452 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HOXD12P35452 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms