Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
KRT6AP02538 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
KRT6AP02538 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14□□□□□ -0.17
KRT6AP02538 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14□□□□□ -0.17
KRT6AP02538 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
KRT6AP02538 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT6AP02538 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
KRT6AP02538 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
KRT6AP02538 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
KRT6AP02538 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.99□□□□□ -0.17
KRT6AP02538 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.99□□□□□ -0.17
KRT6AP02538 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
KRT6AP02538 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.99□□□□□ -0.17
KRT6AP02538 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT6AP02538 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT6AP02538 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.99□□□□□ -0.17
KRT6AP02538 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
KRT6AP02538 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.99□□□□□ -0.17
KRT6AP02538 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.99□□□□□ -0.17
KRT6AP02538 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
KRT6AP02538 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
KRT6AP02538 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT6AP02538 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.99□□□□□ -0.17
KRT6AP02538 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.99□□□□□ -0.17
KRT6AP02538 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.99□□□□□ -0.17
KRT6AP02538 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.99□□□□□ -0.17
KRT6AP02538 HOMER2P2-201ENST00000451621 847 ntBASIC13.99□□□□□ -0.17
KRT6AP02538 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT6AP02538 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.99□□□□□ -0.17
KRT6AP02538 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
KRT6AP02538 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.99□□□□□ -0.17
KRT6AP02538 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.99□□□□□ -0.17
KRT6AP02538 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
KRT6AP02538 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
KRT6AP02538 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
KRT6AP02538 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
KRT6AP02538 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
KRT6AP02538 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
KRT6AP02538 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
KRT6AP02538 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT6AP02538 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT6AP02538 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT6AP02538 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
KRT6AP02538 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT6AP02538 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT6AP02538 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
KRT6AP02538 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT6AP02538 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.99□□□□□ -0.17
KRT6AP02538 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT6AP02538 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
KRT6AP02538 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.99□□□□□ -0.17
KRT6AP02538 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
KRT6AP02538 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
KRT6AP02538 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
KRT6AP02538 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.98□□□□□ -0.17
KRT6AP02538 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.98□□□□□ -0.17
KRT6AP02538 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.98□□□□□ -0.17
KRT6AP02538 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.98□□□□□ -0.17
KRT6AP02538 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 AC073869.1-201ENST00000415574 2762 ntBASIC13.98□□□□□ -0.17
KRT6AP02538 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
KRT6AP02538 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.98□□□□□ -0.17
KRT6AP02538 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.98□□□□□ -0.17
KRT6AP02538 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.98□□□□□ -0.17
KRT6AP02538 CNN2P10-201ENST00000443067 918 ntBASIC13.98□□□□□ -0.17
KRT6AP02538 KRT17P7-201ENST00000451704 1104 ntBASIC13.98□□□□□ -0.17
KRT6AP02538 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.98□□□□□ -0.17
KRT6AP02538 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.98□□□□□ -0.17
KRT6AP02538 AP000812.2-201ENST00000538934 718 ntBASIC13.98□□□□□ -0.17
KRT6AP02538 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.98□□□□□ -0.17
KRT6AP02538 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.98□□□□□ -0.17
KRT6AP02538 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.98□□□□□ -0.17
KRT6AP02538 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.98□□□□□ -0.17
KRT6AP02538 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
KRT6AP02538 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.98□□□□□ -0.17
KRT6AP02538 AC015818.8-201ENST00000587907 1519 ntBASIC13.98□□□□□ -0.17
KRT6AP02538 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.98□□□□□ -0.17
KRT6AP02538 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.98□□□□□ -0.17
KRT6AP02538 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
KRT6AP02538 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
KRT6AP02538 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
KRT6AP02538 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms