Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
KDELR3O43731 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.49□□□□□ -0.09
KDELR3O43731 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 AC073869.2-201ENST00000417338 1026 ntBASIC14.49□□□□□ -0.09
KDELR3O43731 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.49□□□□□ -0.09
KDELR3O43731 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.49□□□□□ -0.09
KDELR3O43731 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.49□□□□□ -0.09
KDELR3O43731 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.49□□□□□ -0.09
KDELR3O43731 IMP3P2-201ENST00000489760 475 ntBASIC14.49□□□□□ -0.09
KDELR3O43731 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.49□□□□□ -0.09
KDELR3O43731 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.49□□□□□ -0.09
KDELR3O43731 FGFR3P5-201ENST00000564496 886 ntBASIC14.49□□□□□ -0.09
KDELR3O43731 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.49□□□□□ -0.09
KDELR3O43731 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.49□□□□□ -0.09
KDELR3O43731 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.49□□□□□ -0.09
KDELR3O43731 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.49□□□□□ -0.09
KDELR3O43731 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.49□□□□□ -0.09
KDELR3O43731 AC006453.1-201ENST00000636037 1257 ntBASIC14.49□□□□□ -0.09
KDELR3O43731 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
KDELR3O43731 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.49□□□□□ -0.09
KDELR3O43731 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.49□□□□□ -0.09
KDELR3O43731 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.49□□□□□ -0.09
KDELR3O43731 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.49□□□□□ -0.09
KDELR3O43731 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KDELR3O43731 TBC1D3J-201ENST00000620719 1426 ntBASIC14.49□□□□□ -0.09
KDELR3O43731 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
KDELR3O43731 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.48□□□□□ -0.09
KDELR3O43731 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KDELR3O43731 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KDELR3O43731 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KDELR3O43731 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
KDELR3O43731 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.48□□□□□ -0.09
KDELR3O43731 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
KDELR3O43731 AC067931.2-201ENST00000623655 2003 ntBASIC14.48□□□□□ -0.09
KDELR3O43731 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KDELR3O43731 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.48□□□□□ -0.09
KDELR3O43731 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KDELR3O43731 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.48□□□□□ -0.09
KDELR3O43731 DUTP3-201ENST00000450025 415 ntBASIC14.48□□□□□ -0.09
KDELR3O43731 UPF3AP2-201ENST00000457924 1132 ntBASIC14.48□□□□□ -0.09
KDELR3O43731 RN7SL769P-201ENST00000469386 295 ntBASIC14.48□□□□□ -0.09
KDELR3O43731 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.48□□□□□ -0.09
KDELR3O43731 RN7SL67P-201ENST00000492147 296 ntBASIC14.48□□□□□ -0.09
KDELR3O43731 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.48□□□□□ -0.09
KDELR3O43731 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.48□□□□□ -0.09
KDELR3O43731 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KDELR3O43731 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.48□□□□□ -0.09
KDELR3O43731 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
KDELR3O43731 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.48□□□□□ -0.09
KDELR3O43731 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KDELR3O43731 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
KDELR3O43731 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
KDELR3O43731 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KDELR3O43731 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
KDELR3O43731 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KDELR3O43731 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KDELR3O43731 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KDELR3O43731 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
KDELR3O43731 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KDELR3O43731 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.48□□□□□ -0.09
KDELR3O43731 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
KDELR3O43731 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.48□□□□□ -0.09
KDELR3O43731 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KDELR3O43731 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
KDELR3O43731 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KDELR3O43731 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KDELR3O43731 AC068418.2-201ENST00000577309 3703 ntBASIC14.48□□□□□ -0.09
KDELR3O43731 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.47□□□□□ -0.09
KDELR3O43731 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
KDELR3O43731 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KDELR3O43731 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.47□□□□□ -0.09
KDELR3O43731 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KDELR3O43731 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KDELR3O43731 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
KDELR3O43731 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
KDELR3O43731 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
KDELR3O43731 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.47□□□□□ -0.09
KDELR3O43731 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
KDELR3O43731 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
KDELR3O43731 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.47□□□□□ -0.09
KDELR3O43731 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.47□□□□□ -0.09
KDELR3O43731 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KDELR3O43731 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms